RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 CASTOR2A6NHX0 329 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 ATP8B1O43520 1251 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 PHF2O75151 1096 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 PSMA2P25787 234 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 TNFRSF8P28908 595 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 GRK4P32298 578 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 GNL1P36915 607 aaPredicted RBP22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 PNPLA4P41247 253 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 CLCNKBP51801 687 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 FAM102AQ5T9C2 384 aaPredicted RBP22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 PMF1Q6P1K2 205 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 KRT222Q8N1A0 295 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 C3orf58Q8NDZ4 430 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 MAGOHBQ96A72 148 aaKnown RBP22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 RNF25Q96BH1 459 aaPredicted RBP22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 ADAM2Q99965 735 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 DPH5Q9H2P9 285 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 SIGLEC16A6NMB1 481 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 GRAP2O75791 330 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 CABYRO75952 493 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 ACAT1P24752 427 aaKnown RBP22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 LRPAP1P30533 357 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 DR1Q01658 176 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 ZFYVE27Q5T4F4 411 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 SMYD5Q6GMV2 418 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 FAM183BPQ6ZVS7 135 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 ARFGAP1Q8N6T3 406 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 C1orf54Q8WWF1 131 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 ATG4AQ8WYN0 398 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 FAM118BQ9BPY3 351 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 TSPYL2Q9H2G4 693 aaPredicted RBP22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 SNX25Q9H3E2 840 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 HUS1O60921 280 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 THP07101 528 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 RALAP11233 206 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 CKBP12277 381 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 GABRB2P47870 512 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 KCNJ1P48048 391 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 PKDCCQ504Y2 493 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 SLAIN1Q8ND83 568 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 CCDC26Q8TAB7 109 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 NEUROG2Q9H2A3 272 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 FAM124BQ9H5Z6 455 aaPredicted RBP22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 STARD7Q9NQZ5 370 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 KIAA1257Q9ULG3 409 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 TRIM17Q9Y577 477 aa22.85■■□□□ 1.25
CHRNA7-228ENST00000637519 MOXD2PA6NHM9 499 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 DAPK3O43293 454 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 ATP2C2O75185 946 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 GABBR2O75899 941 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 POMCP01189 267 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 ECHS1P30084 290 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 PDE4CQ08493 712 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 DSC3Q14574 896 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 MBTPS1Q14703 1052 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 WSCD1Q658N2 575 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 OR6B2Q6IFH4 312 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 TRNP1Q6NT89 227 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 UNC93AQ86WB7 457 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 IPO4Q8TEX9 1081 aaKnown RBP22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 MCRS1Q96EZ8 462 aa22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 TIMM13Q9Y5L4 95 aaPredicted RBP22.84■■□□□ 1.25
CHRNA7-228ENST00000637519 CYB561D2O14569 222 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 TKTP29401 623 aaKnown RBP22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 EPHB4P54760 987 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 TAP1Q03518 808 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 SNX1Q13596 522 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 HLTFQ14527 1009 aaKnown RBP eCLIP22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 TAF5Q15542 800 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 SMTNL2Q2TAL5 461 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 MAATS1Q7Z4T9 603 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 KATNAL2Q8IYT4 538 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 HACE1Q8IYU2 909 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 TSPAN18Q96SJ8 248 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 CHST7Q9NS84 486 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 INPP5FQ9Y2H2 1132 aa22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 R3HDM2Q9Y2K5 976 aaKnown RBP22.83■■□□□ 1.25
CHRNA7-228ENST00000637519 GNRH1P01148 92 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 KRT1P04264 644 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 ZNF268Q14587 947 aaPredicted RBP22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 PAN2Q504Q3 1202 aaKnown RBP22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 RAB6CQ53S08 254 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 TRAF7Q6Q0C0 670 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 LIMS2Q7Z4I7 341 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 B3GNT5Q9BYG0 378 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 RAB6CQ9H0N0 254 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 HPCAL4Q9UM19 191 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 PTPN22Q9Y2R2 807 aa22.83■■□□□ 1.24
CHRNA7-228ENST00000637519 H3BQF6 201 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 PODXLO00592 558 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 FSCN2O14926 492 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 LRCH4O75427 683 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 RPLP2P05387 115 aaKnown RBP22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 HSPA6P17066 643 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 GSCP56915 257 aaPredicted RBP22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 ADCY2Q08462 1091 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 PIGHQ14442 188 aaPredicted RBP22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 CLUL1Q15846 466 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 SH3PXD2AQ5TCZ1 1133 aa22.82■■□□□ 1.24
CHRNA7-228ENST00000637519 CCDC137Q6PK04 289 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms