RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 LIN9Q5TKA1 542 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 PAPD7Q5XG87 772 aaKnown RBP22.3■■□□□ 1.16
CLN8-213ENST00000637156 OVOS1Q6IE37 1185 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 PMF1Q6P1K2 205 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 LRRC43Q8N309 656 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 ZNF564Q8TBZ8 553 aaPredicted RBP22.3■■□□□ 1.16
CLN8-213ENST00000637156 SYT15Q9BQS2 421 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 TMEM175Q9BSA9 504 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 TLR10Q9BXR5 811 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 GPR62Q9BZJ7 368 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 DNAI2Q9GZS0 605 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 ABCB6Q9NP58 842 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 HESX1Q9UBX0 185 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 CDH9Q9ULB4 789 aa22.3■■□□□ 1.16
CLN8-213ENST00000637156 CLDN5O00501 218 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 TRAPPC3O43617 180 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 AMPD2Q01433 879 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 PDE4CQ08493 712 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 MDH1BQ5I0G3 518 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 CYP4A22Q5TCH4 519 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 ZNF365Q70YC5 407 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 DAAM2Q86T65 1068 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 TMEM173Q86WV6 379 aaPredicted RBP22.29■■□□□ 1.16
CLN8-213ENST00000637156 C18orf8Q96DM3 657 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 BTBD6Q96KE9 485 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 RC3H2Q9HBD1 1191 aaKnown RBP22.29■■□□□ 1.16
CLN8-213ENST00000637156 MYH10P35580 1976 aa22.29■■□□□ 1.16
CLN8-213ENST00000637156 NCK2O43639 380 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 BAIAP3O94812 1187 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 PCSK1P29120 753 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 GABRB2P47870 512 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 EPHB4P54760 987 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 BCAR1P56945 870 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 MEI1Q5TIA1 1274 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 LRRTM3Q86VH5 581 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 C7orf61Q8IZ16 206 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 OR10T2Q8NGX3 314 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 MYCBPAPQ8TBZ2 947 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 CALR3Q96L12 384 aaKnown RBP22.28■■□□□ 1.16
CLN8-213ENST00000637156 B3GNT5Q9BYG0 378 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 TRIM7Q9C029 511 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 ARHGEF37A1IGU5 675 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 GABBR2O75899 941 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 OAZ2O95190 189 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 GJB6O95452 261 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 FGBP02675 491 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 ERBB2P04626 1255 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 YWHAHQ04917 246 aaPredicted RBP22.28■■□□□ 1.16
CLN8-213ENST00000637156 FAM171BQ6P995 826 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 PCED1BQ96HM7 432 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 TMEM209Q96SK2 561 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 L2HGDHQ9H9P8 463 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 ST7Q9NRC1 585 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 PARVAQ9NVD7 372 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 PACSIN2Q9UNF0 486 aaPredicted RBP22.28■■□□□ 1.16
CLN8-213ENST00000637156 HYOU1Q9Y4L1 999 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 ALG6Q9Y672 507 aa22.28■■□□□ 1.16
CLN8-213ENST00000637156 TERF1P54274 439 aa22.27■■□□□ 1.16
CLN8-213ENST00000637156 PPIGQ13427 754 aaKnown RBP eCLIP22.27■■□□□ 1.16
CLN8-213ENST00000637156 PTPROQ16827 1216 aa22.27■■□□□ 1.16
CLN8-213ENST00000637156 NT5DC3Q86UY8 548 aa22.27■■□□□ 1.16
CLN8-213ENST00000637156 XYLT1Q86Y38 959 aa22.27■■□□□ 1.16
CLN8-213ENST00000637156 SLC4A5Q9BY07 1137 aa22.27■■□□□ 1.16
CLN8-213ENST00000637156 MRPL47Q9HD33 250 aaKnown RBP22.27■■□□□ 1.16
CLN8-213ENST00000637156 BEST1O76090 585 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 ALDH7A1P49419 539 aaKnown RBP22.26■■□□□ 1.15
CLN8-213ENST00000637156 RGS7P49802 495 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 RPL7AP62424 266 aaKnown RBP22.26■■□□□ 1.15
CLN8-213ENST00000637156 PLCB3Q01970 1234 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 FPGSQ05932 587 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 PPP1R15BQ5SWA1 713 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 FAM171A1Q5VUB5 890 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 TMEM110Q86TL2 294 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 SYCE1Q8N0S2 351 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 THEM5Q8N1Q8 247 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 STK32AQ8WU08 396 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 BCL7CQ8WUZ0 217 aaPredicted RBP22.26■■□□□ 1.15
CLN8-213ENST00000637156 PKMYT1Q99640 499 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 DUSP16Q9BY84 665 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 FNDC1Q4ZHG4 1894 aaPredicted RBP22.26■■□□□ 1.15
CLN8-213ENST00000637156 PIK3R2O00459 728 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 SRGAP2O75044 1071 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 SYN1P17600 705 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 BCAT1P54687 386 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 BST2Q10589 180 aaKnown RBP22.26■■□□□ 1.15
CLN8-213ENST00000637156 ZNF268Q14587 947 aaPredicted RBP22.26■■□□□ 1.15
CLN8-213ENST00000637156 MESDQ14696 234 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 INTS6LQ5JSJ4 861 aaKnown RBP22.26■■□□□ 1.15
CLN8-213ENST00000637156 FEZF2Q8TBJ5 459 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 TMLHEQ9NVH6 421 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 ANAPC7Q9UJX3 599 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 STRIP2Q9ULQ0 834 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 SAR1BQ9Y6B6 198 aa22.26■■□□□ 1.15
CLN8-213ENST00000637156 E5RJQ4 531 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 SYN3O14994 580 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 SETSIPP0DME0 302 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 MRPL58Q14197 206 aaKnown RBP22.25■■□□□ 1.15
CLN8-213ENST00000637156 FUT10Q6P4F1 479 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 TAS1R1Q7RTX1 841 aa22.25■■□□□ 1.15
CLN8-213ENST00000637156 PEX26Q7Z412 305 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms