RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 COASYQ13057 564 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CUL4BQ13620 913 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 FRG1Q14331 258 aaKnown RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 STARD3Q14849 445 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 NCAPHQ15003 741 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 SART3Q15020 963 aaKnown RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 STK11Q15831 433 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 FAM110CQ1W6H9 321 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 FAM209BQ5JX69 171 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ATAT1Q5SQI0 421 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 SH2D4BQ5SQS7 431 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 AKNAD1Q5T1N1 836 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 HHATQ5VTY9 493 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CAPRIN2Q6IMN6 1127 aaKnown RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 GGT6Q6P531 493 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 IYDQ6PHW0 289 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 APOA5Q6Q788 366 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 MEX3BQ6ZN04 569 aaKnown RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 GK5Q6ZS86 529 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 B4GALNT4Q76KP1 1039 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 SV2BQ7L1I2 683 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 BNIPLQ7Z465 357 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 FGD2Q7Z6J4 655 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 SPATA24Q86W54 205 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 RAB11FIP4Q86YS3 637 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CPOQ8IVL8 374 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CRACR2BQ8N4Y2 399 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 TMCO5AQ8N6Q1 288 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ZNF527Q8NB42 609 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ANKRD20A12PQ8NF67 263 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 TRIM58Q8NG06 486 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 RFWD2Q8NHY2 731 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 SLC7A14Q8TBB6 771 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 SYTL5Q8TDW5 730 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 ADAMTS15Q8TE58 950 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 FAM216AQ8WUB2 273 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ANKRD7Q92527 254 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CASP10Q92851 521 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 TUBGCP3Q96CW5 907 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 DACH2Q96NX9 599 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 PLEKHG4BQ96PX9 1271 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ATP6V0BQ99437 205 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 MXD3Q9BW11 206 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CCDC106Q9BWC9 280 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ACPTQ9BZG2 426 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 BRD8Q9H0E9 1235 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ZCWPW1Q9H0M4 648 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 GBP3Q9H0R5 595 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 GLT8D2Q9H1C3 349 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 C1orf21Q9H246 121 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 TMEM60Q9H2L4 133 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 THAP9Q9H5L6 903 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 PDE11AQ9HCR9 933 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 PREBQ9HCU5 417 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 HPS4Q9NQG7 708 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 GLRX2Q9NS18 164 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 RPS6KA6Q9UK32 745 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ING1Q9UK53 422 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 TCFL5Q9UL49 500 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 MAGED2Q9UNF1 606 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 EXOC7Q9UPT5 735 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 GPR55Q9Y2T6 319 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 DTNAQ9Y4J8 743 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 MRFAP1Q9Y605 127 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 TTC21BQ7Z4L5 1316 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PASKQ96RG2 1323 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 TRAV20A0A0B4J274 112 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 hCG_1807616A0A1W2PRN6 198 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ARHGAP10A1A4S6 786 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 C16orf96A6NNT2 1141 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 NT5C1B-RDH14C9J2C7 533 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 L7N2F9 121 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 TULP2O00295 520 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 TRAF5O00463 557 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 UBE2CO00762 179 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 DIAPH2O60879 1101 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 NOL3O60936 208 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 EFCAB14O75071 495 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ULK1O75385 1050 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PIAS2O75928 621 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 F13A1P00488 732 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SERPINC1P01008 464 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ASGR1P07306 291 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 QDPRP09417 244 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SRGAP2CP0DJJ0 459 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 FGFR1P11362 822 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CYP11B2P19099 503 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CDH3P22223 829 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 SFPQP23246 707 aaKnown RBP eCLIP3.23□□□□□ -1.89
VIM-210ENST00000637053 GDI1P31150 447 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 PRKAR1BP31321 381 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 MCM5P33992 734 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 RFC4P35249 363 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 IGFALSP35858 605 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CPA2P48052 419 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 CASP6P55212 293 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 IL2P60568 153 aa3.23□□□□□ -1.89
VIM-210ENST00000637053 ARF3P61204 181 aaPredicted RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 SUMO1P63165 101 aaKnown RBP3.23□□□□□ -1.89
VIM-210ENST00000637053 ARF1P84077 181 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms