RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 HSP90AA4PQ58FG1 418 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 KLHDC7AQ5VTJ3 777 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 SLC8B1Q6J4K2 584 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 PPP1R2P3Q6NXS1 205 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 ELMSAN1Q6PJG2 1045 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF677Q86XU0 584 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 CNGA4Q8IV77 575 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 VSTM4Q8IW00 320 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 THEM5Q8N1Q8 247 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 PPM1KQ8N3J5 372 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 C3orf58Q8NDZ4 430 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 SHC3Q92529 594 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 SYN2Q92777 582 aaPredicted RBP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 FUBP3Q96I24 572 aaKnown RBP eCLIP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 SPAG5Q96R06 1193 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 CDCA3Q99618 268 aaPredicted RBP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 ACBD6Q9BR61 282 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 TTPALQ9BTX7 342 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 NAA15Q9BXJ9 866 aaKnown RBP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 STK33Q9BYT3 514 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 XPO4Q9C0E2 1151 aaKnown RBP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 TTYH3Q9C0H2 523 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 ZBP1Q9H171 429 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 CXCL16Q9H2A7 254 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 GANQ9H2C0 597 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 MMRN2Q9H8L6 949 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 TLR9Q9NR96 1032 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 MTRRQ9UBK8 725 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 DPP7Q9UHL4 492 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 CDH9Q9ULB4 789 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 KIAA1257Q9ULG3 409 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 BARX2Q9UMQ3 279 aaPredicted RBP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 PRG3Q9Y2Y8 225 aaPredicted RBP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 SNX9Q9Y5X1 595 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 ATP8B3O60423 1300 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 LCHNA4D1U4 455 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 F8VZ95 297 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 CYB561D2O14569 222 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 FSCN2O14926 492 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 LPXNO60711 386 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 CILPO75339 1184 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 ITGB1P05556 798 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 ADH1AP07327 375 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 SLC9A1P19634 815 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 POU3F3P20264 500 aaPredicted RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 NDUFV1P49821 464 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF75DP51815 510 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 GUCY2FP51841 1108 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 ZBED6P86452 979 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 TSPY1Q01534 308 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 SMC1AQ14683 1233 aaKnown RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 NFE2Q16621 373 aaPredicted RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 SOWAHAQ2M3V2 549 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 TIGD5Q53EQ6 642 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 TPGS2Q68CL5 300 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 OVOS1Q6IE37 1185 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 KIAA1841Q6NSI8 718 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 CD300LGQ6UXG3 332 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 CACNA2D4Q7Z3S7 1137 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 PPFIBP1Q86W92 1011 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 DCP1BQ8IZD4 617 aaKnown RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 CRYBG2Q8N1P7 616 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 PDCL2Q8N4E4 241 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 UBR7Q8N806 425 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 KLHL23Q8NBE8 558 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 HDAC7Q8WUI4 952 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 SEMA4DQ92854 862 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 NAP1L5Q96NT1 182 aaPredicted RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 MMS19Q96T76 1030 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 PAAF1Q9BRP4 392 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 LSM14BQ9BX40 385 aaKnown RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 NT5C1AQ9BXI3 368 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 EMILIN2Q9BXX0 1053 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 SNX25Q9H3E2 840 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 RXFP1Q9HBX9 757 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 APOBEC3GQ9HC16 384 aaKnown RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 ABCB6Q9NP58 842 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 SIX2Q9NPC8 291 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 MRPL17Q9NRX2 175 aaKnown RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 CISHQ9NSE2 258 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 CUEDC1Q9NWM3 386 aaPredicted RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 FKBPLQ9UIM3 349 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 L1RE1Q9UN81 338 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 STXBP5LQ9Y2K9 1186 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 YBX2Q9Y2T7 364 aaKnown RBP7.16□□□□□ -1.26
UPF3B-205ENST00000636792 MYH10P35580 1976 aa7.16□□□□□ -1.26
UPF3B-205ENST00000636792 TNRC18O15417 2968 aaPredicted RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PPEF2O14830 753 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 TEX33O43247 280 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 MED7O43513 233 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 TBC1D4O60343 1298 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 GFPT2O94808 682 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 CLSTN1O94985 981 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 PROCP04070 461 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 POU2F2P09086 479 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 SRGAP2BP0DMP2 458 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 FERP16591 822 aa7.15□□□□□ -1.26
UPF3B-205ENST00000636792 HNRNPH3P31942 346 aaKnown RBP7.15□□□□□ -1.26
UPF3B-205ENST00000636792 STAT1P42224 750 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms