RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 HSD17B3P37058 310 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 C2orf76Q3KRA6 126 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 POLNQ7Z5Q5 900 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 APOBEC3FQ8IUX4 373 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 UHMK1Q8TAS1 419 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 UBASH3BQ8TF42 649 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SERAC1Q96JX3 654 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ZCWPW1Q9H0M4 648 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CEP72Q9P209 647 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 LIMA1Q9UHB6 759 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CIDEBQ9UHD4 219 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF232Q9UNY5 417 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 PPP2R2CQ9Y2T4 447 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 RRP15Q9Y3B9 282 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 DYRK1BQ9Y463 629 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SLC33A1O00400 549 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 TRIM66O15016 1216 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF208O43345 1280 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ASNA1O43681 348 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 AP1G2O75843 785 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 MED26O95402 600 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 MZF1P28698 734 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ALDH3A2P51648 485 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 PLD1Q13393 1074 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 IQGAP2Q13576 1575 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SPATA21Q7Z572 469 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 STARD8Q92502 1023 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 WBP11Q9Y2W2 641 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 PLXNC1O60486 1568 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 MDFIC2A0A1B0GVS7 189 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 FAM170AA1A519 330 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 GSAPA4D1B5 854 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 WRBO00258 174 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CEBPGP53567 150 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ACTR2P61160 394 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 DCTN2Q13561 401 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ADRM1Q16186 407 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 FAM83EQ2M2I3 478 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 TTC33Q6PID6 262 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CCDC81Q6ZN84 652 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 PROSER1Q86XN7 944 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 MAGEC3Q8TD91 643 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 GTF3C2Q8WUA4 911 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 PRRG4Q9BZD6 226 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 NECTIN3Q9NQS3 549 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF879B4DU55 563 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 BTN3A3O00478 584 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CYB5AP00167 134 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 TNNI3P19429 210 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SLCO1A2P46721 670 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ARFIP2P53365 341 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 TMEM132DQ14C87 1099 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 FSCN1Q16658 493 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 USP41Q3LFD5 358 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 C12orf60Q5U649 245 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 TCEAL6Q6IPX3 200 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 LRRC47Q8N1G4 583 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CHCHD6Q9BRQ6 235 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 WWOXQ9NZC7 414 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF624Q9P2J8 865 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CLEC4AQ9UMR7 237 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ARID1AO14497 2285 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SCAF11Q99590 1463 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SRP72O76094 671 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PDGFRBP09619 1106 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 LBPP18428 481 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CHMP24386 653 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 STAT3P40763 770 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CASP4P49662 377 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 STARD3Q14849 445 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TYW3Q6IPR3 259 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SYDE1Q6ZW31 735 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 MTSS1LQ765P7 747 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SGCDQ92629 289 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ENTPD7Q9NQZ7 604 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 RWDD2AQ9UIY3 292 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PLA2G4CQ9UP65 541 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 UBN2Q6ZU65 1347 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 NACAE9PAV3 2078 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 GNG14A0A1W2PPG7 69 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SLC28A2O43868 658 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TCEA3O75764 348 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 GFPT2O94808 682 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 OR6B1O95007 311 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ASNSP08243 561 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ALDH7A1P49419 539 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 BCAMP50895 628 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 DRG2P55039 364 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 GEMIN4P57678 1058 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 IER5Q5VY09 327 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 IL31Q6EBC2 164 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 USP51Q70EK9 711 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CHERPQ8IWX8 916 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 AKAP1Q92667 903 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 BHLHE41Q9C0J9 482 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CD209Q9NNX6 404 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms