RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	EPHB2	P29323	1055 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CYP24A1	Q07973	514 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ABRA	Q8N0Z2	381 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	MSL3	Q8N5Y2	521 aa	Known RBP	14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SPDYE1	Q8NFV5	336 aa	Predicted RBP	14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FEZF2	Q8TBJ5	459 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	MRPS31	Q92665	395 aa	Known RBP	14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	MED15	Q96RN5	788 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FTHL17	Q9BXU8	183 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	IQANK1	A0A1B0GTG1	560 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	E2F8	A0AVK6	867 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FOXP2	O15409	715 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	XYLB	O75191	536 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	GART	P22102	1010 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RAB27A	P51159	221 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	P3H1	Q32P28	736 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KIAA1755	Q5JYT7	1200 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	C10orf120	Q5SQS8	335 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ZNF571	Q7Z3V5	609 aa	Predicted RBP	14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FAM131B	Q86XD5	332 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SH2D3C	Q8N5H7	860 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	DDX56	Q9NY93	547 aa	Known RBP	14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997		H7C4K7	107 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TH	P07101	528 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TMEM253	P0C7T8	217 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RASSF2	P50749	326 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SH2D4B	Q5SQS7	431 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CDKAL1	Q5VV42	579 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RAPGEF5	Q92565	580 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PGLYRP2	Q96PD5	576 aa		14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	14.99	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CCDC195	A0A1B0GUA6	201 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997		M0QYT0	321 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CKM	P06732	381 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ETFB	P38117	255 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CARS	P49589	748 aa	Known RBP	14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	COG7	P83436	770 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ADCY2	Q08462	1091 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	IL17A	Q16552	155 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	IL31	Q6EBC2	164 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	LLGL2	Q6P1M3	1020 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TRIM67	Q6ZTA4	783 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RAB44	Q7Z6P3	723 aa	Predicted RBP	14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PACS2	Q86VP3	889 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KCTD17	Q8N5Z5	321 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	EFHB	Q8N7U6	833 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SCLY	Q96I15	445 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SPATS2L	Q9NUQ6	558 aa	Known RBP	14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	DCTN4	Q9UJW0	460 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SLC45A1	Q9Y2W3	748 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CFLAR	O15519	480 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PPP1R11	O60927	126 aa	Predicted RBP	14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ENDOD1	O94919	500 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	EIF3B	P55884	814 aa	Known RBP	14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FBXO22	Q8NEZ5	403 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SLC35C1	Q96A29	364 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SH3BP1	Q9Y3L3	701 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SLC26A4	O43511	780 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KRT38	O76015	456 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SMIM10L2A	P0DMW4	78 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SMIM10L2B	P0DMW5	78 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	MYL4	P12829	197 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	BMP6	P22004	513 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CELF3	Q5SZQ8	465 aa	Known RBP	14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CHSY1	Q86X52	802 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KLF6	Q99612	283 aa	Predicted RBP	14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CYP4F11	Q9HBI6	524 aa		14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	AFF4	Q9UHB7	1163 aa	Known RBP	14.98	□□□□□ -0.01
NEDD4L-238	ENST00000635997	P4HA2	O15460	535 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	STIL	Q15468	1287 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ANO4	Q32M45	955 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CTXN3	Q4LDR2	81 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CARNS1	A5YM72	827 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RAD51C	O43502	376 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CDR2	Q01850	454 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PIGH	Q14442	188 aa	Predicted RBP	14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	HIF1A	Q16665	826 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	LRRC8D	Q7L1W4	858 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	REXO1L1P	Q8IX06	675 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RBM15	Q96T37	977 aa	Known RBP eCLIP	14.97	□□□□□ -0.01	6e-14	■■■■□ 26.6
NEDD4L-238	ENST00000635997	DDX23	Q9BUQ8	820 aa	Known RBP	14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KNL1	Q8NG31	2342 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PSMD10	O75832	226 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ITGBL1	O95965	494 aa	Predicted RBP	14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SLC1A1	P43005	524 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TAP1	Q03518	808 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	FUT2	Q10981	343 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SNCB	Q16143	134 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KYNU	Q16719	465 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TAS2R42	Q7RTR8	314 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	ELOA2	Q8IYF1	753 aa	Predicted RBP	14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SLITRK1	Q96PX8	696 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PITPNM3	Q9BZ71	974 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SAGE1	Q9NXZ1	904 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	KIF1C	O43896	1103 aa	Known RBP	14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	TYK2	P29597	1187 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CCND3	P30281	292 aa	Predicted RBP	14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	PPM1A	P35813	382 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	AVPR1A	P37288	418 aa		14.97	□□□□□ -0.01
NEDD4L-238	ENST00000635997	SARS	P49591	514 aa	Known RBP	14.97	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms