RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 CNTNAP2Q9UHC6 1331 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 LRRC14BA6NHZ5 514 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 H3BUI4 141 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 H7C1Q1 480 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 M0R3H8 397 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RFPL1O75677 317 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DNAJB5O75953 348 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 LATS1O95835 1130 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GRPP07492 148 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RHOP08100 348 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 FAM163BP0C2L3 166 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CT47B1P0C2W7 299 aaPredicted RBP3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 KCNJ5P48544 419 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 EPHB1P54762 984 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 EVA1CP58658 441 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ANAPC15P60006 121 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SSBP2P81877 361 aaPredicted RBP3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GRM1Q13255 1194 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PIN1Q13526 163 aaPredicted RBP3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 FGL2Q14314 439 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TBC1D25Q3MII6 688 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TMEM108Q6UXF1 575 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GAS2L3Q86XJ1 694 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RASAL3Q86YV0 1011 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DENND1CQ8IV53 801 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SLC46A1Q96NT5 459 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 FSD1LQ9BXM9 530 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ADGRE3Q9BY15 652 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SMOC2Q9H3U7 446 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 IL17RBQ9NRM6 502 aa3.64□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 hCG_2014768A0A024R1R8 64 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ANKRD62A6NC57 917 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MANSC4A6NHS7 340 aaPredicted RBP3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CYSRT1A8MQ03 144 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MYO1CO00159 1063 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 HNRNPCP07910 306 aaKnown RBP eCLIP3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 NPSP0C0P6 89 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PF4V1P10720 104 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PDE6CP51160 858 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TPTEP56180 551 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 EEFSECP57772 596 aaKnown RBP3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RAB1AP62820 205 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TUBA4AP68366 448 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GPSM2P81274 684 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MGAT5BQ3V5L5 792 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 KHDC1LQ5JSQ8 128 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CAMKK1Q8N5S9 505 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SOCS4Q8WXH5 440 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DPF1Q92782 380 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 HOOK2Q96ED9 719 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SUCLG2Q96I99 432 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DPH1Q9BZG8 443 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SLC12A5Q9H2X9 1139 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GLOD4Q9HC38 313 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 AASDHPPTQ9NRN7 309 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ADAM21Q9UKJ8 722 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 GABRQQ9UN88 632 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PCDHA1Q9Y5I3 950 aa3.63□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 H0YIZ8 118 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 QSOX1O00391 747 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DCLK1O15075 740 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ERC2O15083 957 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ALDH1L1O75891 902 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 UNC5CO95185 931 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 AHSGP02765 367 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TUBB4AP04350 444 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 IL6RP08887 468 aaPredicted RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CHRM5P08912 532 aaPredicted RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PTGER1P34995 402 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 EXOSC9Q06265 439 aaKnown RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SRSF7Q16629 238 aaKnown RBP eCLIP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PROSER3Q2NL68 480 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 IFIT1BQ5T764 474 aaKnown RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 VPS53Q5VIR6 699 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MORN5Q5VZ52 161 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 LMBRD2Q68DH5 695 aaPredicted RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CXorf57Q6NSI4 855 aaKnown RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PARS2Q7L3T8 475 aaKnown RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CATIPQ7Z7H3 387 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 AMIGO2Q86SJ2 522 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 FANCBQ8NB91 859 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DIS3LQ8TF46 1054 aaKnown RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 REPS1Q96D71 796 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CGRRF1Q99675 332 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MESP1Q9BRJ9 268 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 NRIP3Q9NQ35 241 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SERHLQ9NQF3 203 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DUSP22Q9NRW4 184 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TRMT13Q9NUP7 481 aaKnown RBP3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DLL3Q9NYJ7 618 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 XPR1Q9UBH6 696 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TMX2Q9Y320 296 aa3.62□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 A0A087WWL8 130 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PPM1DO15297 605 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 FRS3O43559 492 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 VPS4BO75351 444 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 USP1O94782 785 aa3.61□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PDGFRBP09619 1106 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms