RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	ITPRIPL2	Q3MIP1	535 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	PDCL2	Q8N4E4	241 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	SPEM1	Q8N4L4	309 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	CSGALNACT2	Q8N6G5	542 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	LRRC52	Q8N7C0	313 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	PDILT	Q8N807	584 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	C1orf127	Q8N9H9	656 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	NELL1	Q92832	810 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	DNAJC19	Q96DA6	116 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	ANKRD36BP1	Q96IX9	119 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	USP28	Q96RU2	1077 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	PANK2	Q9BZ23	570 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	LRRC27	Q9C0I9	530 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	SMG9	Q9H0W8	520 aa	Known RBP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	PCIF1	Q9H4Z3	704 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	RBM12	Q9NTZ6	932 aa	Known RBP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	DDX43	Q9NXZ2	648 aa	Known RBP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	CDV3	Q9UKY7	258 aa	Known RBP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	OBSL1	O75147	1896 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	TNNC2	P02585	160 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	ACAT1	P24752	427 aa	Known RBP	11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	PCSK1	P29120	753 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	WEE1	P30291	646 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	NLRP12	P59046	1061 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	RPL10A	P62906	217 aa	Known RBP	11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	RBP5	P82980	135 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	TNK2	Q07912	1038 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	MYO1E	Q12965	1108 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	PON2	Q15165	354 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	TXNDC11	Q6PKC3	985 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247		Q6ZS52	159 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	LRRTM3	Q86VH5	581 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	ADGRF2	Q8IZF7	708 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	CMTM8	Q8IZV2	173 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	TMEM86A	Q8N2M4	240 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	GPD1L	Q8N335	351 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	MAB21L3	Q8N8X9	362 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	TTC16	Q8NEE8	873 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	EXOC4	Q96A65	974 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	INTS4	Q96HW7	963 aa	Known RBP	11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	ACBD6	Q9BR61	282 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	CBWD1	Q9BRT8	395 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	STRA6	Q9BX79	667 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	MTMR12	Q9C0I1	747 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	KIF9	Q9HAQ2	790 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	IL21	Q9HBE4	155 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	UXT	Q9UBK9	157 aa	Predicted RBP	11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	L1RE1	Q9UN81	338 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	SNX9	Q9Y5X1	595 aa		11.13	□□□□□ -0.63
UBE3A-223	ENST00000631247	NCOR2	Q9Y618	2525 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	DENND4C	Q5VZ89	1909 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	PRR5-ARHGAP8	B1AHC4	643 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	CHURC1-FNTB	B4DL54	471 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	KIAA0391	O15091	583 aa	Known RBP	11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	STX6	O43752	255 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	PRPF6	O94906	941 aa	Known RBP	11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	CKM	P06732	381 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	TDGF1	P13385	188 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	LHX1	P48742	406 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	FNTB	P49356	437 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	WNT7B	P56706	349 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	ARHGAP8	P85298	464 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	AMPD3	Q01432	767 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	AMPD2	Q01433	879 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	SIM2	Q14190	667 aa	Predicted RBP	11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	SLC39A14	Q15043	492 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	DDR2	Q16832	855 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	INTS6L	Q5JSJ4	861 aa	Known RBP	11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	HEATR6	Q6AI08	1181 aa	Known RBP	11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	LAIR1	Q6GTX8	287 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	CEP68	Q76N32	757 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	SCN4B	Q8IWT1	228 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	STKLD1	Q8NE28	680 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	LEO1	Q8WVC0	666 aa	Predicted RBP	11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	LRRC3B	Q96PB8	259 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	SLC46A2	Q9BY10	475 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	TNMD	Q9H2S6	317 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	PDE11A	Q9HCR9	933 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	TRPC7	Q9HCX4	862 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	ABCB6	Q9NP58	842 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	GKN1	Q9NS71	199 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	TDP1	Q9NUW8	608 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247	MTMR6	Q9Y217	621 aa		11.12	□□□□□ -0.63
UBE3A-223	ENST00000631247		A0A087X0B3	334 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	FRMD3	A2A2Y4	597 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	ZNF233	A6NK53	670 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247		K7ELQ4	463 aa	Predicted RBP	11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	CLSTN1	O94985	981 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	CYP2F1	P24903	491 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	CNR2	P34972	360 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	GPR15	P49685	360 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	ASIC1	P78348	528 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	SPEM2	Q0P670	501 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	GAS6	Q14393	721 aa		11.11	□□□□□ -0.63
UBE3A-223	ENST00000631247	SURF1	Q15526	300 aa		11.11	□□□□□ -0.63

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