RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 AOPEPQ8N6M6 819 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 UBR7Q8N806 425 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 TMX3Q96JJ7 454 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 KLHL32Q96NJ5 620 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 CAMKK2Q96RR4 588 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 CAAP1Q9H8G2 361 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 TDP1Q9NUW8 608 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 SAP30BPQ9UHR5 308 aaKnown RBP4.41□□□□□ -1.7
CHD2-219ENST00000630016 GCC2Q8IWJ2 1684 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 WASHC2AQ641Q2 1341 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 ZNF521Q96K83 1311 aa4.41□□□□□ -1.7
CHD2-219ENST00000630016 EP400Q96L91 3159 aa4.4□□□□□ -1.7
CHD2-219ENST00000630016 HNRNPCP07910 306 aaKnown RBP eCLIP4.4□□□□□ -1.71
CHD2-219ENST00000630016 CPEP16870 476 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 HMGB2P26583 209 aaKnown RBP4.4□□□□□ -1.71
CHD2-219ENST00000630016 C1QTNF8P60827 252 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 SLC44A4Q53GD3 710 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 CT47A1Q5JQC4 288 aaPredicted RBP4.4□□□□□ -1.71
CHD2-219ENST00000630016 PLAC9Q5JTB6 97 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 ZNF365Q70YC5 407 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 KRT28Q7Z3Y7 464 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 FAM177A1Q8N128 213 aaPredicted RBP4.4□□□□□ -1.71
CHD2-219ENST00000630016 CFAP52Q8N1V2 620 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 DENND1AQ8TEH3 1009 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 DDX17Q92841 729 aaKnown RBP4.4□□□□□ -1.71
CHD2-219ENST00000630016 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
CHD2-219ENST00000630016 SMOQ99835 787 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 IMPG2Q9BZV3 1241 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 VSX1Q9NZR4 365 aaPredicted RBP4.4□□□□□ -1.71
CHD2-219ENST00000630016 INTUQ9ULD6 942 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 THRAP3Q9Y2W1 955 aaKnown RBP4.4□□□□□ -1.71
CHD2-219ENST00000630016 PXDNQ92626 1479 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 CROCC2H7BZ55 1655 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 NWD2Q9ULI1 1742 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 ADGRA2Q96PE1 1338 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 NUP155O75694 1391 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 ABCC11Q96J66 1382 aa4.4□□□□□ -1.71
CHD2-219ENST00000630016 MARF1Q9Y4F3 1742 aaKnown RBP4.39□□□□□ -1.71
CHD2-219ENST00000630016 A0A0B4J269 797 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 VWC2LB2RUY7 222 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 TARM1B6A8C7 271 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 TRIM38O00635 465 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 CD1AP06126 327 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 SBK3P0C264 359 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 NR2F6P10588 404 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 GYS2P54840 703 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 POU6F2P78424 691 aaPredicted RBP4.39□□□□□ -1.71
CHD2-219ENST00000630016 CDC42EP1Q00587 391 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 TUBB3Q13509 450 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 STAT4Q14765 748 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 TAPT1Q6NXT6 567 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 CEP85Q6P2H3 762 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 NSUN7Q8NE18 718 aaKnown RBP4.39□□□□□ -1.71
CHD2-219ENST00000630016 IL17RDQ8NFM7 739 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 NRG4Q8WWG1 115 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 DPF2Q92785 391 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 RAB24Q969Q5 203 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 BHMT2Q9H2M3 363 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 EHD3Q9NZN3 535 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 SERGEFQ9UGK8 458 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 BTBD3Q9Y2F9 522 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 PCDHB1Q9Y5F3 818 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 NEXMIFQ5QGS0 1516 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 CDC42BPGQ6DT37 1551 aa4.39□□□□□ -1.71
CHD2-219ENST00000630016 TECPR2O15040 1411 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 RRBP1Q9P2E9 1410 aaKnown RBP4.38□□□□□ -1.71
CHD2-219ENST00000630016 SLC43A1O75387 559 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 MOSPD3O75425 235 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 LATS1O95835 1130 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 RHOP08100 348 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 AGXTP21549 392 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 TARDBPQ13148 414 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD2-219ENST00000630016 TMPRSS9Q7Z410 1059 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 YTHDF3Q7Z739 585 aaKnown RBP4.38□□□□□ -1.71
CHD2-219ENST00000630016 AMOTL1Q8IY63 956 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 SLC17A8Q8NDX2 589 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 TMIEQ8NEW7 156 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 CHAC2Q8WUX2 184 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 SSH1Q8WYL5 1049 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 TRIB1Q96RU8 372 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 TPSD1Q9BZJ3 242 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD2-219ENST00000630016 GLI3P10071 1580 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 SPATA31A5Q5VU36 1347 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 SPATA31A7Q8IWB4 1347 aa4.38□□□□□ -1.71
CHD2-219ENST00000630016 ADGRB2O60241 1585 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 NRXN3Q9Y4C0 1643 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 F5H697 171 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 TRIAP1O43715 76 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 PRKD3O94806 890 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 NXPH3O95157 252 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 ANXA1P04083 346 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 HMGB1P09429 215 aaKnown RBP4.37□□□□□ -1.71
CHD2-219ENST00000630016 ZFXP17010 805 aaPredicted RBP4.37□□□□□ -1.71
CHD2-219ENST00000630016 NDUFB7P17568 137 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 WASP42768 502 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 RAB39AQ14964 217 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 GPR162Q16538 588 aa4.37□□□□□ -1.71
CHD2-219ENST00000630016 ZNF551Q7Z340 670 aaPredicted RBP4.37□□□□□ -1.71
CHD2-219ENST00000630016 AFAP1L2Q8N4X5 818 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms