RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 CRTAC1Q9NQ79 661 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 HSFX1Q9UBD0 423 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 KIAA1257Q9ULG3 409 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 MAFFQ9ULX9 164 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 PCDHB4Q9Y5E5 795 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 PCDHGC5Q9Y5F6 944 aa10.48□□□□□ -0.73
SOX2-OT-249ENST00000628810 MYBPHLA2RUH7 354 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 LRRC53A6NM62 1247 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 RFXAPO00287 272 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 ATP2C2O75185 946 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 VNN2O95498 520 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 ADH1AP07327 375 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 PNMA6AP0CW24 399 aaPredicted RBP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 PTPN1P18031 435 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 ACAT1P24752 427 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 OR1D2P34982 312 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 CLCN1P35523 988 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 STAT1P42224 750 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 FXR1P51114 621 aaKnown RBP eCLIP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 PSMC1P62191 440 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 NFE2Q16621 373 aaPredicted RBP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 CFAP221Q4G0U5 840 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 ARHGAP17Q68EM7 881 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 LILRA6Q6PI73 481 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 TMC6Q7Z403 805 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 ACOT1Q86TX2 421 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 LRRTM3Q86VH5 581 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 PACS2Q86VP3 889 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZNF461Q8TAF7 563 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 SYN2Q92777 582 aaPredicted RBP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 PCED1BQ96HM7 432 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 FUBP3Q96I24 572 aaKnown RBP eCLIP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 SPAG5Q96R06 1193 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 DNAJC7Q99615 494 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 CDCA3Q99618 268 aaPredicted RBP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 PRDM12Q9H4Q4 367 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 ABCB6Q9NP58 842 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 AIPL1Q9NZN9 384 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 PLXNA3P51805 1871 aa10.47□□□□□ -0.73
SOX2-OT-249ENST00000628810 PTPRDP23468 1912 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 MTMR11A4FU01 709 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 O00370 1275 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 CYP26A1O43174 497 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 MFAP3LO75121 409 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 CLASP2O75122 1294 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 PAPLNO95428 1278 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 PDGFRBP09619 1106 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 OR4Q2P0C623 313 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 VDRP11473 427 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 KRT5P13647 590 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 CPB1P15086 417 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 ATF2P15336 505 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 RPL17P18621 184 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 HNRNPH3P31942 346 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 CASP14P31944 242 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 PRKCIP41743 596 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 CLCN4P51793 760 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 BPIFB4P59827 614 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 ORC1Q13415 861 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 KCNC3Q14003 757 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 ADGRE1Q14246 886 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 COL19A1Q14993 1142 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 STILQ15468 1287 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 DUSP6Q16828 381 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 CCDC142Q17RM4 750 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 SLC39A12Q504Y0 691 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZNF394Q53GI3 561 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 E4F1Q66K89 784 aaPredicted RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 RNF19BQ6ZMZ0 732 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 C4orf50Q6ZRC1 276 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 RTL10Q7L3V2 364 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 ADGRD2Q7Z7M1 963 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 PPFIBP1Q86W92 1011 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 CNGA4Q8IV77 575 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 FUKQ8N0W3 1084 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZNF397Q8NF99 534 aaPredicted RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 SPPL2BQ8TCT7 592 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 EPS8L1Q8TE68 723 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 HDAC7Q8WUI4 952 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 PPP2R3CQ969Q6 453 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 MYLPFQ96A32 169 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 HNRNPABQ99729 332 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 ZSWIM1Q9BR11 485 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 NSUN3Q9H649 340 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 TMLHEQ9NVH6 421 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 IMPACTQ9P2X3 320 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 FBXW11Q9UKB1 542 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 GTF3C4Q9UKN8 822 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 LUC7L2Q9Y383 392 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 MTCH2Q9Y6C9 303 aa10.46□□□□□ -0.73
SOX2-OT-249ENST00000628810 PATJQ8NI35 1801 aa10.46□□□□□ -0.74
SOX2-OT-249ENST00000628810 SZT2Q5T011 3432 aa10.46□□□□□ -0.74
SOX2-OT-249ENST00000628810 TGM5O43548 720 aa10.45□□□□□ -0.74
SOX2-OT-249ENST00000628810 GLUD1P00367 558 aa10.45□□□□□ -0.74
SOX2-OT-249ENST00000628810 TPM1P09493 284 aa10.45□□□□□ -0.74
SOX2-OT-249ENST00000628810 CCDC130P13994 396 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms