RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 B2RBV5 119 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 AP1G2O75843 785 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 STIP1P31948 543 aaKnown RBP13.32□□□□□ -0.28
SCN8A-209ENST00000627620 GTF2A2P52657 109 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 FCGRTP55899 365 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 ZNF484Q5JVG2 852 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 FAXCQ5TGI0 409 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 TRPM8Q7Z2W7 1104 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 FAM162AQ96A26 154 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 FRMD8Q9BZ67 464 aaPredicted RBP13.32□□□□□ -0.28
SCN8A-209ENST00000627620 RIC8BQ9NVN3 520 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 CRLS1Q9UJA2 301 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 TRIM16O95361 564 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 SLC2A3P11169 496 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 FDFT1P37268 417 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 FNTAP49354 379 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 CASP4P49662 377 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 CLCN3P51790 818 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 CDH18Q13634 790 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 IL17RAQ96F46 866 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 HEATR9A2RTY3 570 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 NAMPTP43490 491 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 KCNK10P57789 538 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 NFIAQ12857 509 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 PTPAQ15257 358 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 TJAP1Q5JTD0 557 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 POTEAQ6S8J7 498 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 ZNF556Q9HAH1 456 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 MRGBPQ9NV56 204 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 PLAGL2Q9UPG8 496 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 TRIM49D1C9J1S8 452 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 STX7O15400 261 aaKnown RBP13.32□□□□□ -0.28
SCN8A-209ENST00000627620 DGKIO75912 1065 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 LRG1P02750 347 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 AARS2Q5JTZ9 985 aaKnown RBP13.32□□□□□ -0.28
SCN8A-209ENST00000627620 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
SCN8A-209ENST00000627620 MOXD1Q6UVY6 613 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 ACOT1Q86TX2 421 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 ARMC2Q8NEN0 867 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 C17orf80Q9BSJ5 609 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 COLEC11Q9BWP8 271 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 REREQ9P2R6 1566 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 SUPT20HL2P0C7V6 817 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 KCNA4P22459 653 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 RGS2P41220 211 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 MPZL3Q6UWV2 235 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 PRPF39Q86UA1 669 aaKnown RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 BHMTQ93088 406 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 WNK4Q96J92 1243 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 SPATA16Q9BXB7 569 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 IL1RL2Q9HB29 575 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 A0A087X0T9 212 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 B3GAT3O94766 335 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 FAM228BP0C875 321 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 PTPN7P35236 360 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 NPTX2P47972 431 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 ZNF177Q13360 481 aaPredicted RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 DYNC1I2Q13409 638 aaKnown RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 SLC15A2Q16348 729 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 ARHGAP15Q53QZ3 475 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 SGF29Q96ES7 293 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 ZFYVE19Q96K21 471 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 RPRD1AQ96P16 312 aaPredicted RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 GID8Q9NWU2 228 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 GPR182O15218 404 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 YY1P25490 414 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 SREBF1P36956 1147 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 SLC11A2P49281 568 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 POU4F1Q01851 419 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 DENND5BQ6ZUT9 1274 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 CD302Q8IX05 232 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 FAM129AQ9BZQ8 928 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 BRD8Q9H0E9 1235 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 LOC100653049A0A140TA62 436 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 KRT34O76011 436 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 VDRP11473 427 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 TGM2P21980 687 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 CSE1LP55060 971 aaKnown RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 FAM83EQ2M2I3 478 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 C2CD6Q53TS8 623 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 CYGBQ8WWM9 190 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 C16orf96A6NNT2 1141 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 PGK2P07205 417 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 BACE1P56817 501 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 CAPRIN2Q6IMN6 1127 aaKnown RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 LRRC8BQ6P9F7 803 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 LAYNQ6UX15 382 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 EFL1Q7Z2Z2 1120 aaKnown RBP13.31□□□□□ -0.28
SCN8A-209ENST00000627620 ZDHHC15Q96MV8 337 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 CBWD1Q9BRT8 395 aa13.31□□□□□ -0.28
SCN8A-209ENST00000627620 GEMP55040 296 aa13.3□□□□□ -0.28
SCN8A-209ENST00000627620 GIT2Q14161 759 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms