RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 VCPP55072 806 aaKnown RBP23.87■■□□□ 1.41
SF1-220ENST00000626028 STARD6P59095 220 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 CWF19L1Q69YN2 538 aaKnown RBP23.87■■□□□ 1.41
SF1-220ENST00000626028 OR6B3Q8NGW1 331 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 FAM122AQ96E09 287 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 SPATA17Q96L03 361 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 TRMT61BQ9BVS5 477 aaKnown RBP23.87■■□□□ 1.41
SF1-220ENST00000626028 TASP1Q9H6P5 420 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 IL21Q9HBE4 155 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 CRTAC1Q9NQ79 661 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 EHD2Q9NZN4 543 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 NXF1Q9UBU9 619 aaKnown RBP23.87■■□□□ 1.41
SF1-220ENST00000626028 CACNA1HO95180 2353 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 KIF26AQ9ULI4 1882 aaPredicted RBP23.87■■□□□ 1.41
SF1-220ENST00000626028 NRG2O14511 850 aaPredicted RBP23.86■■□□□ 1.41
SF1-220ENST00000626028 STX10O60499 249 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 NOL4O94818 638 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 ASS1P00966 412 aaKnown RBP23.86■■□□□ 1.41
SF1-220ENST00000626028 GJA1P17302 382 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 PTPN5P54829 565 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 FKBP3Q00688 224 aaKnown RBP23.86■■□□□ 1.41
SF1-220ENST00000626028 C1orf220Q5T0J3 134 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 FOXR2Q6PJQ5 311 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 MFSD6LQ8IWD5 586 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 SMYD4Q8IYR2 804 aaPredicted RBP23.86■■□□□ 1.41
SF1-220ENST00000626028 FLCNQ8NFG4 579 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 IRF7Q92985 503 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 FAXDC2Q96IV6 333 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 MRPL45Q9BRJ2 306 aaKnown RBP23.86■■□□□ 1.41
SF1-220ENST00000626028 IMPG2Q9BZV3 1241 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 COL4A2P08572 1712 aa23.86■■□□□ 1.41
SF1-220ENST00000626028 HELZP42694 1942 aaKnown RBP23.85■■□□□ 1.41
SF1-220ENST00000626028 PDGFRBP09619 1106 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 EPB41P11171 864 aaKnown RBP23.85■■□□□ 1.41
SF1-220ENST00000626028 RFX1P22670 979 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 UBE2HP62256 183 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 ZC3H3Q8IXZ2 948 aaKnown RBP23.85■■□□□ 1.41
SF1-220ENST00000626028 ADSSL1Q8N142 457 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 TMEM105Q8N8V8 129 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 GIPC2Q8TF65 315 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 DHTKD1Q96HY7 919 aaPredicted RBP23.85■■□□□ 1.41
SF1-220ENST00000626028 TNIP3Q96KP6 325 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 DDX23Q9BUQ8 820 aaKnown RBP23.85■■□□□ 1.41
SF1-220ENST00000626028 PLA2G2FQ9BZM2 168 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 ELOVL4Q9GZR5 314 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 TBC1D17Q9HA65 648 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 TMEM8AQ9HCN3 771 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 CA14Q9ULX7 337 aa23.85■■□□□ 1.41
SF1-220ENST00000626028 F5P12259 2224 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 A8MXQ7 604 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 PSMA7O14818 248 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 TRIM66O15016 1216 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 SLC16A3O15427 465 aaKnown RBP23.84■■□□□ 1.41
SF1-220ENST00000626028 ATP2C2O75185 946 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 F11P03951 625 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 PTPN1P18031 435 aaKnown RBP23.84■■□□□ 1.41
SF1-220ENST00000626028 TRIM21P19474 475 aaKnown RBP23.84■■□□□ 1.41
SF1-220ENST00000626028 MLLT6P55198 1093 aaPredicted RBP23.84■■□□□ 1.41
SF1-220ENST00000626028 NLRP12P59046 1061 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 MLF2Q15773 248 aaPredicted RBP23.84■■□□□ 1.41
SF1-220ENST00000626028 SLC44A4Q53GD3 710 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 GPR158Q5T848 1215 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 IER5LQ5T953 404 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 VITQ6UXI7 678 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 B3GALNT2Q8NCR0 500 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 MYLPFQ96A32 169 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 PCED1BQ96HM7 432 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 OSBPL6Q9BZF3 934 aa23.84■■□□□ 1.41
SF1-220ENST00000626028 GALR2O43603 387 aaPredicted RBP23.83■■□□□ 1.41
SF1-220ENST00000626028 HCRTO43612 131 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 GLULP15104 373 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 PIK3CAP42336 1068 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 PSMC1P62191 440 aaKnown RBP23.83■■□□□ 1.41
SF1-220ENST00000626028 FCHO2Q0JRZ9 810 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 DDR2Q16832 855 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 UNC93AQ86WB7 457 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 ARID3BQ8IVW6 561 aaPredicted RBP23.83■■□□□ 1.41
SF1-220ENST00000626028 CCDC150Q8NCX0 1101 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 ST13P5Q8NFI4 369 aaPredicted RBP23.83■■□□□ 1.41
SF1-220ENST00000626028 NELL2Q99435 816 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 FAM124BQ9H5Z6 455 aaPredicted RBP23.83■■□□□ 1.41
SF1-220ENST00000626028 BRD9Q9H8M2 597 aa23.83■■□□□ 1.41
SF1-220ENST00000626028 SLC38A8A6NNN8 435 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 HLA-DRAP01903 254 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 CYP27A1Q02318 531 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 PPP3CAQ08209 521 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 KRT39Q6A163 491 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 TMEM150AQ86TG1 271 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 MRPS31Q92665 395 aaKnown RBP23.82■■□□□ 1.4
SF1-220ENST00000626028 C8orf48Q96LL4 319 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 DNAI2Q9GZS0 605 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 SMYD3Q9H7B4 428 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 CYP3A43Q9HB55 503 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 SIT1Q9Y3P8 196 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 ATP8B3O60423 1300 aa23.82■■□□□ 1.4
SF1-220ENST00000626028 HEPACAM2A8MVW5 462 aa23.81■■□□□ 1.4
SF1-220ENST00000626028 STK25O00506 426 aa23.81■■□□□ 1.4
SF1-220ENST00000626028 ZNF263O14978 683 aa23.81■■□□□ 1.4
SF1-220ENST00000626028 GADD45BO75293 160 aaPredicted RBP23.81■■□□□ 1.4
SF1-220ENST00000626028 PFKLP17858 780 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms