RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, human

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC23A-215	ENST00000625395	SF3B3	Q15393	1217 aa	Known RBP	4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	SLC17A8	Q8NDX2	589 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	NTN5	Q8WTR8	489 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	VOPP1	Q96AW1	172 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	HSPBAP1	Q96EW2	488 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	TRIB1	Q96RU8	372 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	OSBPL9	Q96SU4	736 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	CNPPD1	Q9BV87	410 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	KMT5A	Q9NQR1	393 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	SLC45A2	Q9UMX9	530 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	SLIT2	O94813	1529 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	NHSL1	Q5SYE7	1610 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	PCSK5	Q92824	1860 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	KIF15	Q9NS87	1388 aa		4.9	□□□□□ -1.63
SEC23A-215	ENST00000625395	PRSS29P	A6NIE9	313 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395		E9PLN8	166 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	C1R	P00736	705 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	GJB1	P08034	283 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	RARB	P10826	455 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	LPO	P22079	712 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	GATA3	P23771	443 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	PLA2G5	P39877	138 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	IL12RB1	P42701	662 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	NEK2	P51955	445 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	HABP2	Q14520	560 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	TAPT1	Q6NXT6	567 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	PTF1A	Q7RTS3	328 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	ZBTB46	Q86UZ6	589 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	BOLL	Q8N9W6	283 aa	Known RBP	4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	TMEM125	Q96AQ2	219 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	RGMA	Q96B86	450 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	SMAD5	Q99717	465 aa	Known RBP	4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	VKORC1	Q9BQB6	163 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	SYT17	Q9BSW7	474 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	LRFN3	Q9BTN0	628 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	ENTPD2	Q9Y5L3	495 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	ABCC5	O15440	1437 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	DCC	P43146	1447 aa		4.89	□□□□□ -1.63
SEC23A-215	ENST00000625395	FYCO1	Q9BQS8	1478 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	WDR27	A2RRH5	827 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	POLRMT	O00411	1230 aa	Known RBP	4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	TOR1B	O14657	336 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	IGLV2-14	P01704	120 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	GRIA3	P42263	894 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	NPTX2	P47972	431 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	C21orf58	P58505	322 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	PREPL	Q4J6C6	727 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	EMC10	Q5UCC4	262 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	KAZN	Q674X7	775 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	KRT28	Q7Z3Y7	464 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	LRIG1	Q96JA1	1093 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	UROC1	Q96N76	676 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	MRPL46	Q9H2W6	279 aa	Known RBP	4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	ETAA1	Q9NY74	926 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	ANKRD6	Q9Y2G4	727 aa		4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	LUC7L2	Q9Y383	392 aa	Known RBP	4.88	□□□□□ -1.63
SEC23A-215	ENST00000625395	POLR2A	P24928	1970 aa	Known RBP	4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	CEP152	O94986	1710 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	E2F8	A0AVK6	867 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	ANKRD62	A6NC57	917 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	TRIAP1	O43715	76 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	MATN4	O95460	622 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	PGS1	Q32NB8	556 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	CD300E	Q496F6	205 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	COLEC12	Q5KU26	742 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	HEATR3	Q7Z4Q2	680 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	PPP1R32	Q7Z5V6	425 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	SLC30A5	Q8TAD4	765 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	LPIN2	Q92539	896 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	GPATCH3	Q96I76	525 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	FBXL20	Q96IG2	436 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	ALG8	Q9BVK2	526 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	KIAA1586	Q9HCI6	787 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	KLC4	Q9NSK0	619 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	LMBRD1	Q9NUN5	540 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	PCDHA3	Q9Y5H8	950 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395	KANK1	Q14678	1352 aa		4.87	□□□□□ -1.63
SEC23A-215	ENST00000625395		A0A0B4J269	797 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	ZNF785	A8K8V0	405 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	MASP2	O00187	686 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	MGST3	O14880	152 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	C1QL1	O75973	258 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	IL33	O95760	270 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	FTL	P02792	175 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	TYR	P14679	529 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	MAP2K6	P52564	334 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	TUBB3	Q13509	450 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	MVB12A	Q96EY5	273 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	PUS7	Q96PZ0	661 aa	Known RBP	4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	NELL2	Q99435	816 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	SPATA5L1	Q9BVQ7	753 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	ABCF2	Q9UG63	623 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	SPATA31A5	Q5VU36	1347 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	NPHP3	Q7Z494	1330 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	SPATA31A7	Q8IWB4	1347 aa		4.86	□□□□□ -1.63
SEC23A-215	ENST00000625395	TRPM2	O94759	1503 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms