RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 RPLP0P6Q8NHW5 317 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 POMGNT1Q8WZA1 660 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 MYRFLQ96LU7 910 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 P2RY13Q9BPV8 354 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 ACBD6Q9BR61 282 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 FAM213AQ9BRX8 229 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 ECT2Q9H8V3 914 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 TBC1D7Q9P0N9 293 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 SIX4Q9UIU6 781 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 RALYQ9UKM9 306 aaKnown RBP11.89□□□□□ -0.51
DDX41-218ENST00000625286 AGAP1Q9UPQ3 857 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 SLC8A2Q9UPR5 921 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 WNT6Q9Y6F9 365 aa11.89□□□□□ -0.51
DDX41-218ENST00000625286 GOLGA8IPA6NC78 632 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 C2orf78A6NCI8 922 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 GOLGA8JA6NMD2 632 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 SOBPA7XYQ1 873 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 H3BQV1 296 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 GABRDO14764 452 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 TBCAO75347 108 aaKnown RBP11.88□□□□□ -0.51
DDX41-218ENST00000625286 ITGB3P05106 788 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 CCDC192P0DO97 292 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
DDX41-218ENST00000625286 DDX6P26196 483 aaKnown RBP eCLIP11.88□□□□□ -0.51
DDX41-218ENST00000625286 MPLP40238 635 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
DDX41-218ENST00000625286 MESP2Q0VG99 397 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 BFSP1Q12934 665 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 RABEP1Q15276 862 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 SOWAHAQ2M3V2 549 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 EML3Q32P44 896 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 SV2CQ496J9 727 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 INTS6LQ5JSJ4 861 aaKnown RBP11.88□□□□□ -0.51
DDX41-218ENST00000625286 LIMS2Q7Z4I7 341 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 SFTPA1Q8IWL2 248 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 CAMKK1Q8N5S9 505 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 ARL14EPQ8N8R7 260 aaPredicted RBP11.88□□□□□ -0.51
DDX41-218ENST00000625286 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
DDX41-218ENST00000625286 GCNAQ96QF7 691 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 LSM14BQ9BX40 385 aaKnown RBP11.88□□□□□ -0.51
DDX41-218ENST00000625286 DDX43Q9NXZ2 648 aaKnown RBP11.88□□□□□ -0.51
DDX41-218ENST00000625286 INVSQ9Y283 1065 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 CLIC4Q9Y696 253 aa11.88□□□□□ -0.51
DDX41-218ENST00000625286 PTPRJQ12913 1337 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 IGF2RP11717 2491 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 THADAQ6YHU6 1953 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 MYO18AQ92614 2054 aaKnown RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 A0A087X0B3 334 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 GIPC1O14908 333 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 FOXD2O60548 495 aaPredicted RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 ATG13O75143 517 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 AKAP3O75969 853 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 IL18RAPO95256 599 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 KCNK5O95279 499 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 CSH1P0DML2 217 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 CSH2P0DML3 217 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 DRD1P21728 446 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 LMO2P25791 158 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 USP46P62068 366 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 SHC2P98077 582 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 USP4Q13107 963 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 MTF1Q14872 753 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 PDGFRLQ15198 375 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 LARP1BQ659C4 914 aaKnown RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 IL31Q6EBC2 164 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 FAM171BQ6P995 826 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 SYT13Q7L8C5 426 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 NT5DC4Q86YG4 428 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 BRSK2Q8IWQ3 736 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 CSGALNACT2Q8N6G5 542 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 C12orf50Q8NA57 414 aaPredicted RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 OSCP1Q8WVF1 389 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 MRPS31Q92665 395 aaKnown RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 TRMT2BQ96GJ1 504 aaKnown RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 CHAMP1Q96JM3 812 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 CBWD1Q9BRT8 395 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 KIF9Q9HAQ2 790 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 PDE11AQ9HCR9 933 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 ABCB6Q9NP58 842 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 DUS2Q9NX74 493 aaKnown RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 GDAP2Q9NXN4 497 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 EBF1Q9UH73 591 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 ZMYM5Q9UJ78 669 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 FBXO2Q9UK22 296 aaPredicted RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 NME7Q9Y5B8 376 aa11.87□□□□□ -0.51
DDX41-218ENST00000625286 ASCC3Q8N3C0 2202 aaKnown RBP11.87□□□□□ -0.51
DDX41-218ENST00000625286 K7EQS6 105 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 HNRNPLP14866 589 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDX41-218ENST00000625286 OPRD1P41143 372 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 TSPY1Q01534 308 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 DMC1Q14565 340 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 POSTNQ15063 836 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 NFE2Q16621 373 aaPredicted RBP11.86□□□□□ -0.51
DDX41-218ENST00000625286 L1TD1Q5T7N2 865 aaKnown RBP11.86□□□□□ -0.51
DDX41-218ENST00000625286 LMBRD2Q68DH5 695 aaPredicted RBP11.86□□□□□ -0.51
DDX41-218ENST00000625286 FAM173BQ6P4H8 233 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms