RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 RIBC1Q8N443 379 aaPredicted RBP18.6■□□□□ 0.57
PCF11-207ENST00000624931 TMEM40Q8WWA1 233 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 SNF8Q96H20 258 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 RXFP1Q9HBX9 757 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 HMX1Q9NP08 348 aaPredicted RBP18.6■□□□□ 0.57
PCF11-207ENST00000624931 TMEM110-MUSTN1A8MSY1 372 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 WFS1O76024 890 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 CLTAP09496 248 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 MXI1P50539 228 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 PRMT2P55345 433 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 PTK6Q13882 451 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 E2F5Q15329 346 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 RHBDF2Q6PJF5 856 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 SPATA21Q7Z572 469 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 TBC1D1Q86TI0 1168 aaPredicted RBP18.6■□□□□ 0.57
PCF11-207ENST00000624931 PALB2Q86YC2 1186 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 THNSL1Q8IYQ7 743 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 TMC2Q8TDI7 906 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 SLC20A1Q8WUM9 679 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 CDC42EP4Q9H3Q1 356 aaKnown RBP18.6■□□□□ 0.57
PCF11-207ENST00000624931 ECT2Q9H8V3 914 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 WBP1LQ9NX94 342 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 LGALS13Q9UHV8 139 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 TNFSF13BQ9Y275 285 aa18.6■□□□□ 0.57
PCF11-207ENST00000624931 TTC4O95801 387 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 GAS8O95995 478 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 SLC1A1P43005 524 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 ACLYP53396 1101 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 NCALDP61601 193 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 NR1H3Q13133 447 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 PSMD6Q15008 389 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 FAM133BQ5BKY9 247 aaKnown RBP18.59■□□□□ 0.57
PCF11-207ENST00000624931 RELL1Q8IUW5 271 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 EPS8L1Q8TE68 723 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 ZNF516Q92618 1163 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 MAGEB18Q96M61 343 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 RAB3IPQ96QF0 476 aaPredicted RBP18.59■□□□□ 0.57
PCF11-207ENST00000624931 NUP85Q9BW27 656 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 UNC93B1Q9H1C4 597 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 ARHGEF3Q9NR81 526 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 NOCTQ9UK39 431 aaKnown RBP18.59■□□□□ 0.57
PCF11-207ENST00000624931 C15orf41Q9Y2V0 281 aa18.59■□□□□ 0.57
PCF11-207ENST00000624931 TMEM120BA0PK00 339 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 OGTO15294 1046 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 UBOX5O94941 541 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 GNAT1P11488 350 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 DARSP14868 501 aaKnown RBP18.58■□□□□ 0.57
PCF11-207ENST00000624931 C1QTNF8P60827 252 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 CENPCQ03188 943 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 ENPEPQ07075 957 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 RNF180Q86T96 592 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 ZDHHC14Q8IZN3 488 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 SEMA4DQ92854 862 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 KLHL29Q96CT2 875 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 TRIM11Q96F44 468 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 TRAIPQ9BWF2 469 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 GCOM2Q9BZD3 368 aaPredicted RBP18.58■□□□□ 0.57
PCF11-207ENST00000624931 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.58■□□□□ 0.575e-9■■■■■ 38.6
PCF11-207ENST00000624931 KIAA1586Q9HCI6 787 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 NKIRAS1Q9NYS0 192 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 KLHL14Q9P2G3 628 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 PRKAG3Q9UGI9 489 aa18.58■□□□□ 0.57
PCF11-207ENST00000624931 TCP11X1B4DZS4 312 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 CTSHP09668 335 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 CHRNB2P17787 502 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 SLCO1A2P46721 670 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 IFNAR2P48551 515 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 STAT4Q14765 748 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 SNX17Q15036 470 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 SGO2Q562F6 1265 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 SCARA3Q6AZY7 606 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 AADACL2Q6P093 401 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 ARHGEF19Q8IW93 802 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 BRSK2Q8IWQ3 736 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 PCSK9Q8NBP7 692 aaKnown RBP18.57■□□□□ 0.56
PCF11-207ENST00000624931 FAM212AQ96EL1 285 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 ABCF3Q9NUQ8 709 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 CPSF3Q9UKF6 684 aaKnown RBP18.57■□□□□ 0.56
PCF11-207ENST00000624931 PTPN22Q9Y2R2 807 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.57■□□□□ 0.56
PCF11-207ENST00000624931 ANK1P16157 1881 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 LDHAP00338 332 aaKnown RBP18.57■□□□□ 0.56
PCF11-207ENST00000624931 MYBL1P10243 752 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 MARCKSL1P49006 195 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 ATP11AP98196 1134 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 CDR2Q01850 454 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 PPARDQ03181 441 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 KRT17Q04695 432 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 MTFR1Q15390 333 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 ACAD10Q6JQN1 1059 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 VSTM1Q6UX27 236 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 ENOSF1Q7L5Y1 443 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 CATSPER4Q7RTX7 472 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 USP37Q86T82 979 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 TMEM130Q8N3G9 435 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 TAS1R2Q8TE23 839 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 SHC3Q92529 594 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 ZNF653Q96CK0 615 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 PCDHB18PQ96TA0 734 aa18.57■□□□□ 0.56
PCF11-207ENST00000624931 TMEM8AQ9HCN3 771 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms