RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FOXR1Q6PIV2 292 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 CROCCP2Q86T23 111 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 ARFGAP1Q8N6T3 406 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 TLCD1Q96CP7 247 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 MCRS1Q96EZ8 462 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 OSMRQ99650 979 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 TMEM109Q9BVC6 243 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 LRCH4O75427 683 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 CDKN2BP42772 138 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 ADAM17P78536 824 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 GUCY1A3Q02108 690 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 ZBTB6Q15916 424 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 LCLAT1Q6UWP7 414 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 BBOF1Q8ND07 529 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 PGM2Q96G03 612 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 ZMAT2Q96NC0 199 aaKnown RBP20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 NT5C1AQ9BXI3 368 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 EIF2AQ9BY44 585 aaKnown RBP20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 CXCL16Q9H2A7 254 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 METTL5Q9NRN9 209 aaKnown RBP20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 LRRD1A4D1F6 860 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 CAND2O75155 1236 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 KRT7P08729 469 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 KLRC2P26717 231 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 LSP1P33241 339 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 MAGOHP61326 146 aaKnown RBP20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 UBAP2Q5T6F2 1119 aaKnown RBP20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 CCDC25Q86WR0 208 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 IFNL1Q8IU54 200 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 BCAS4Q8TDM0 211 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 SLC12A6Q9UHW9 1150 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 ANAPC5Q9UJX4 755 aa20.77■□□□□ 0.92
PCDHB11-202ENST00000624887 C3orf70A6NLC5 250 aaPredicted RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 FAM155AB1AL88 458 aaPredicted RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 HAS3O00219 553 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 ECM2O94769 699 aaPredicted RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 YARSP54577 528 aaKnown RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 PPP2R2AP63151 447 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 BYSLQ13895 437 aaKnown RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 HADHQ16836 314 aaKnown RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 USP6NLQ92738 828 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 LENG1Q96BZ8 264 aaPredicted RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 ACSF2Q96CM8 615 aaPredicted RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 DNPEPQ9ULA0 475 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 EFR3BQ9Y2G0 817 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 DCDC2CA8MYV0 355 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 CYP3A5P20815 502 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 AXLP30530 894 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 CHKAP35790 457 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 PSEN2P49810 448 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 HIC1Q14526 733 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 ACAP1Q15027 740 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 STILQ15468 1287 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 ALKAL1Q6UXT8 129 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 GSTA5Q7RTV2 222 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 EMC1Q8N766 993 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 UBA3Q8TBC4 463 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 CCHCR1Q8TD31 782 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 PPP1R13LQ8WUF5 828 aa20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 CDC42EP4Q9H3Q1 356 aaKnown RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 DRG1Q9Y295 367 aaKnown RBP20.76■□□□□ 0.91
PCDHB11-202ENST00000624887 SCN1AP35498 2009 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 KIF3CO14782 793 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 IL1R2P27930 398 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 VPS41P49754 854 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 CPT1AP50416 773 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 C6orf118Q5T5N4 469 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 LRRC52Q8N7C0 313 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 SMC1BQ8NDV3 1235 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 BEST2Q8NFU1 509 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 IPO4Q8TEX9 1081 aaKnown RBP20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 CNTN3Q9P232 1028 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 TSPAN16Q9UKR8 245 aa20.75■□□□□ 0.91
PCDHB11-202ENST00000624887 SRRM3A6NNA2 597 aaPredicted RBP20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 CCL14Q16627 93 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 SKIDA1Q1XH10 827 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 DPH6Q7L8W6 267 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 DNAJB3Q8WWF6 145 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 NKD2Q969F2 451 aaPredicted RBP20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 MIS12Q9H081 205 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 ZWILCHQ9H900 591 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 TUBGCP4Q9UGJ1 667 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 ZNF148Q9UQR1 794 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 HES2Q9Y543 173 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 PPEF2O14830 753 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 OASLQ15646 514 aaKnown RBP20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 TAZQ16635 292 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 FAM102AQ5T9C2 384 aaPredicted RBP20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 IZUMO3Q5VZ72 239 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 C17orf99Q6UX52 265 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 ALLCQ8N6M5 410 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 TRIM6Q9C030 488 aaPredicted RBP20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 EPN3Q9H201 632 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 NXF3Q9H4D5 531 aaKnown RBP20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 ABT1Q9ULW3 272 aaKnown RBP20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 Q9Y3F1 56 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 SNX9Q9Y5X1 595 aa20.74■□□□□ 0.91
PCDHB11-202ENST00000624887 PFKMP08237 780 aa20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 VCPP55072 806 aaKnown RBP20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 PTGISQ16647 500 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms