RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SIX1Q15475 284 aaPredicted RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 FAM47CQ5HY64 1035 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 GDF6Q6KF10 455 aaPredicted RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 TMEM86AQ8N2M4 240 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 SMG8Q8ND04 991 aaKnown RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 OR6B3Q8NGW1 331 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 PGBD4Q96DM1 585 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 CPXM1Q96SM3 734 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 ERVK-5Q9HDB9 667 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 FAM105AQ9NUU6 356 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 WHRNQ9P202 907 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 USTQ9Y2C2 406 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 ESYT3A0FGR9 886 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 GOLGA6L10A6NI86 522 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 DAPK3O43293 454 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 AKAP5P24588 427 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 GNL1P36915 607 aaPredicted RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 GUCY2FP51841 1108 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 EIF3BP55884 814 aaKnown RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 SLMAPQ14BN4 828 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 PPP1R7Q15435 360 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 KCNA10Q16322 511 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 C2CD6Q53TS8 623 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 TFDP3Q5H9I0 405 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 ZFYVE27Q5T4F4 411 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 VSIG1Q86XK7 387 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 GSPT2Q8IYD1 628 aaKnown RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 CCDC89Q8N998 374 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 CAPNS2Q96L46 248 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 CNPY3Q9BT09 278 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 APOL6Q9BWW8 343 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 TRIM7Q9C029 511 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 ST3GAL5Q9UNP4 418 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 HES2Q9Y543 173 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 TRIP12Q14669 1992 aaPredicted RBP17.22■□□□□ 0.35
LDB3-208ENST00000623007 ITIH2P19823 946 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 WARSP23381 471 aaKnown RBP17.22■□□□□ 0.35
LDB3-208ENST00000623007 MAP2K2P36507 400 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 ZNF143P52747 638 aaPredicted RBP17.22■□□□□ 0.35
LDB3-208ENST00000623007 TAS2R40P59535 323 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 MGAT3Q09327 533 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 BST2Q10589 180 aaKnown RBP17.22■□□□□ 0.35
LDB3-208ENST00000623007 PTGISQ16647 500 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 SOWAHAQ2M3V2 549 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 GOLGA7BQ2TAP0 167 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 PKDCCQ504Y2 493 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 FAM26DQ5JW98 314 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 MAP3K21Q5TCX8 1036 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 CCSAPQ6IQ19 270 aaPredicted RBP17.22■□□□□ 0.35
LDB3-208ENST00000623007 ADAT2Q7Z6V5 191 aaKnown RBP17.22■□□□□ 0.35
LDB3-208ENST00000623007 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
LDB3-208ENST00000623007 TMEM110Q86TL2 294 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 IQCKQ8N0W5 287 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 ANKRD52Q8NB46 1076 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 HSFY1Q96LI6 401 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 PPP1R10Q96QC0 940 aaKnown RBP17.22■□□□□ 0.35
LDB3-208ENST00000623007 SH3GL2Q99962 352 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 SLC4A5Q9BY07 1137 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 FOXP3Q9BZS1 431 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 DCLK3Q9C098 648 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 ARHGAP39Q9C0H5 1083 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 PSD3Q9NYI0 1048 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 NR2E1Q9Y466 385 aa17.22■□□□□ 0.35
LDB3-208ENST00000623007 ZSCAN5CA6NGD5 496 aaPredicted RBP17.21■□□□□ 0.35
LDB3-208ENST00000623007 DPYSL4O14531 572 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 KRT1P04264 644 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 THP07101 528 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 RALAP11233 206 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 GPD1P21695 349 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 ECHS1P30084 290 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 SSTR3P32745 418 aaPredicted RBP17.21■□□□□ 0.35
LDB3-208ENST00000623007 RFC1P35251 1148 aaPredicted RBP17.21■□□□□ 0.35
LDB3-208ENST00000623007 IRX5P78411 483 aaPredicted RBP17.21■□□□□ 0.35
LDB3-208ENST00000623007 FAM102AQ5T9C2 384 aaPredicted RBP17.21■□□□□ 0.35
LDB3-208ENST00000623007 CYP4A22Q5TCH4 519 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 PHLDB2Q86SQ0 1253 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
LDB3-208ENST00000623007 SLITRK1Q96PX8 696 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 HMGXB4Q9UGU5 601 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
LDB3-208ENST00000623007 TRIP11Q15643 1979 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 FAM170AA1A519 330 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 GOLGA8SH3BPF8 625 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 GGCXP38435 758 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 LHX1P48742 406 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 MRPS25P82663 173 aaKnown RBP17.2■□□□□ 0.34
LDB3-208ENST00000623007 PTK6Q13882 451 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 GLRA4Q5JXX5 417 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 MAP7D3Q8IWC1 876 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 SLC35F5Q8WV83 523 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 GLT1D1Q96MS3 346 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 TBCBQ99426 244 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 MRPL45Q9BRJ2 306 aaKnown RBP17.2■□□□□ 0.34
LDB3-208ENST00000623007 ST7Q9NRC1 585 aa17.2■□□□□ 0.34
LDB3-208ENST00000623007 METTL5Q9NRN9 209 aaKnown RBP17.2■□□□□ 0.34
LDB3-208ENST00000623007 DRG1Q9Y295 367 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms