RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 FBRSL1Q9HCM7 1045 aaKnown RBP25.55■■□□□ 1.68
CPSF1-214ENST00000622776 OLFML3Q9NRN5 406 aa25.55■■□□□ 1.68
CPSF1-214ENST00000622776 GTF3C4Q9UKN8 822 aa25.55■■□□□ 1.68
CPSF1-214ENST00000622776 ITGA11Q9UKX5 1188 aa25.55■■□□□ 1.68
CPSF1-214ENST00000622776 SLC8A2Q9UPR5 921 aa25.55■■□□□ 1.68
CPSF1-214ENST00000622776 OBSL1O75147 1896 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 GOLGA8IPA6NC78 632 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 GOLGA8JA6NMD2 632 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 AXIN1O15169 862 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 TADA3O75528 432 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 RPP40O75818 363 aaKnown RBP25.54■■□□□ 1.68
CPSF1-214ENST00000622776 NOL4O94818 638 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 EGFP01133 1207 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 IDEP14735 1019 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 PDGFRLQ15198 375 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 CACNA2D4Q7Z3S7 1137 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 OSTM1Q86WC4 334 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 TRMT2BQ96GJ1 504 aaKnown RBP25.54■■□□□ 1.68
CPSF1-214ENST00000622776 LOXL4Q96JB6 756 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 MYRFLQ96LU7 910 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 GDAP2Q9NXN4 497 aa25.54■■□□□ 1.68
CPSF1-214ENST00000622776 KMT2BQ9UMN6 2715 aaPredicted RBP25.53■■□□□ 1.68
CPSF1-214ENST00000622776 RNF40O75150 1001 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 PDCP20941 246 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 GALK1P51570 392 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 ALCAMQ13740 583 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 SPATA18Q8TC71 538 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 CBWD1Q9BRT8 395 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 ARRDC1-AS1Q9H2J1 176 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 PDE11AQ9HCR9 933 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 SNX9Q9Y5X1 595 aa25.53■■□□□ 1.68
CPSF1-214ENST00000622776 KRT19P08727 400 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 DRD1P21728 446 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 RBP5P82980 135 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 FAM160A1Q05DH4 1040 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 CUL4AQ13619 759 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 MTF1Q14872 753 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 CCDC142Q17RM4 750 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 FAM173BQ6P4H8 233 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 KBTBD6Q86V97 674 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 TOP6BLQ8N6T0 577 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 P2RY13Q9BPV8 354 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 FGFBP2Q9BYJ0 223 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 PCIF1Q9H4Z3 704 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 TMEM206Q9H813 350 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 TRPC7Q9HCX4 862 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 POLR3BQ9NW08 1133 aaPredicted RBP25.52■■□□□ 1.68
CPSF1-214ENST00000622776 SIX4Q9UIU6 781 aa25.52■■□□□ 1.68
CPSF1-214ENST00000622776 GABRDO14764 452 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 CCDC192P0DO97 292 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 PCSK1P29120 753 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 GJA4P35212 333 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 RAP1GAPP47736 663 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 LHX1P48742 406 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 CEBPZQ03701 1054 aaKnown RBP25.51■■□□□ 1.67
CPSF1-214ENST00000622776 CFAP221Q4G0U5 840 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 AASDHQ4L235 1098 aaPredicted RBP25.51■■□□□ 1.67
CPSF1-214ENST00000622776 NAIF1Q69YI7 327 aaPredicted RBP25.51■■□□□ 1.67
CPSF1-214ENST00000622776 CCDC73Q6ZRK6 1079 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 SPATA2LQ8IUW3 424 aaPredicted RBP25.51■■□□□ 1.67
CPSF1-214ENST00000622776 ADGRF2Q8IZF7 708 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 CPA6Q8N4T0 437 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 CAMKK1Q8N5S9 505 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 NOC3LQ8WTT2 800 aaKnown RBP25.51■■□□□ 1.67
CPSF1-214ENST00000622776 SLC22A12Q96S37 553 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 CYP2S1Q96SQ9 504 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 MTMR12Q9C0I1 747 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 ECT2Q9H8V3 914 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 PANK4Q9NVE7 773 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 GREB1Q4ZG55 1949 aa25.51■■□□□ 1.67
CPSF1-214ENST00000622776 TRAV19A0A0A6YYK7 116 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 FRMD3A2A2Y4 597 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 HCRTO43612 131 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 EPN2O95208 641 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 USP17L7P0C7H9 530 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 TMEM191BP0C7N4 346 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 RESTQ13127 1097 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 SF3A2Q15428 464 aaKnown RBP25.5■■□□□ 1.67
CPSF1-214ENST00000622776 ZNF77Q15935 545 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 FBXO43Q4G163 708 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 SCN4BQ8IWT1 228 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 EXOC4Q96A65 974 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 FUBP3Q96I24 572 aaKnown RBP eCLIP25.5■■□□□ 1.67
CPSF1-214ENST00000622776 PANK2Q9BZ23 570 aa25.5■■□□□ 1.67
CPSF1-214ENST00000622776 DUS2Q9NX74 493 aaKnown RBP25.5■■□□□ 1.67
CPSF1-214ENST00000622776 AKAP3O75969 853 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 PRPF6O94906 941 aaKnown RBP25.49■■□□□ 1.67
CPSF1-214ENST00000622776 CKMP06732 381 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 ZNF806P0C7X5 589 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 STAT6P42226 847 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 LIMK1P53667 647 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 CCDC6Q16204 474 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 SOWAHAQ2M3V2 549 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 FAM171BQ6P995 826 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 GPD1LQ8N335 351 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 C12orf50Q8NA57 414 aaPredicted RBP25.49■■□□□ 1.67
CPSF1-214ENST00000622776 TTC16Q8NEE8 873 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 OSCP1Q8WVF1 389 aa25.49■■□□□ 1.67
CPSF1-214ENST00000622776 DDX1Q92499 740 aaKnown RBP25.49■■□□□ 1.67
CPSF1-214ENST00000622776 WNT6Q9Y6F9 365 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms