RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 YWHAGP61981 247 aaKnown RBP eCLIP16.55■□□□□ 0.24
NPHP4-211ENST00000622020 RCN2Q14257 317 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 ALYREFQ86V81 257 aaKnown RBP16.55■□□□□ 0.24
NPHP4-211ENST00000622020 NRG4Q8WWG1 115 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 SERAC1Q96JX3 654 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 CALN1Q9BXU9 219 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 TRIM55Q9BYV6 548 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 CYP26B1Q9NR63 512 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 XPO7Q9UIA9 1087 aaKnown RBP16.55■□□□□ 0.24
NPHP4-211ENST00000622020 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.55■□□□□ 0.24
NPHP4-211ENST00000622020 QSER1Q2KHR3 1735 aa16.55■□□□□ 0.24
NPHP4-211ENST00000622020 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 NVLO15381 856 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 WFS1O76024 890 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 NR3C2P08235 984 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 PYGBP11216 843 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 ATP6V1C1P21283 382 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 PSMA2P25787 234 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 IL1R2P27930 398 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 RPL22P35268 128 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 SLC45A4Q5BKX6 768 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 FAXCQ5TGI0 409 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 PHF13Q86YI8 300 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 EGFL6Q8IUX8 553 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 SAMD3Q8N6K7 520 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 FBXO27Q8NI29 283 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 JOSD2Q8TAC2 188 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 ZNF526Q8TF50 670 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 DDX50Q9BQ39 737 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 NTPCRQ9BSD7 190 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 A6NHS1 94 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 GARTP22102 1010 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 MYL6P60660 151 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 IRX4P78413 519 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 PSMD6Q15008 389 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 TSNAXIP1Q2TAA8 658 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 NPNTQ6UXI9 565 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 TMEM174Q8WUU8 243 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 CLPTM1LQ96KA5 538 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 MTMR12Q9C0I1 747 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 NXF1Q9UBU9 619 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 IKBKGQ9Y6K9 419 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 UBR3Q6ZT12 1888 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 MYH9P35579 1960 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 E5RJQ4 531 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 GSC2O15499 205 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 ITGBL1O95965 494 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 MYL2P10916 166 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 ESRRAP11474 423 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 ARL4CP56559 192 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 MTMR2Q13614 643 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 KBTBD12Q3ZCT8 623 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 TDRPQ86YL5 185 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 DEPTORQ8TB45 409 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 SCG3Q8WXD2 468 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 TFAP2BQ92481 460 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 ATG4CQ96DT6 458 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 TRIM56Q9BRZ2 755 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 SLC13A1Q9BZW2 595 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 CYLDQ9NQC7 956 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 SPATS2LQ9NUQ6 558 aaKnown RBP16.54■□□□□ 0.24
NPHP4-211ENST00000622020 WASF2Q9Y6W5 498 aa16.54■□□□□ 0.24
NPHP4-211ENST00000622020 ZC3H11AO75152 810 aaKnown RBP eCLIP16.53■□□□□ 0.24
NPHP4-211ENST00000622020 TBX10O75333 385 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 LGR5O75473 907 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 SFNP31947 248 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ELK3P41970 407 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 CCNG1P51959 295 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 THOC5Q13769 683 aaKnown RBP16.53■□□□□ 0.24
NPHP4-211ENST00000622020 EFHC2Q5JST6 749 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.53■□□□□ 0.24
NPHP4-211ENST00000622020 KIAA0319LQ8IZA0 1049 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 CCDC33Q8N5R6 958 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 PDCD7Q8N8D1 485 aaKnown RBP16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ATP11CQ8NB49 1132 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 CFAP36Q96G28 342 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 BTBD10Q9BSF8 475 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 DCLRE1BQ9H816 532 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 SENP1Q9P0U3 644 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ZNRF3Q9ULT6 936 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 LRRC37AA6NMS7 1700 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 CCDC22O60826 627 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 DGAT1O75907 488 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ZWINTO95229 277 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ASNSP08243 561 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 KDSRQ06136 332 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
NPHP4-211ENST00000622020 PTK7Q13308 1070 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 RFX6Q8HWS3 928 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ZNF276Q8N554 614 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ATP6V0A1Q93050 837 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 TAS2R1Q9NYW7 299 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 SLC9A2Q9UBY0 812 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
NPHP4-211ENST00000622020 ENO1P06733 434 aaKnown RBP16.52■□□□□ 0.24
NPHP4-211ENST00000622020 PHBP35232 272 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms