RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RNPEPQ9H4A4 650 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 ASB7Q9H672 318 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 SAYSD1Q9NPB0 183 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 NXF1Q9UBU9 619 aaKnown RBP9.92□□□□□ -0.82
PDPN-212ENST00000621990 TJP2Q9UDY2 1190 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 FETUBQ9UGM5 382 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDPN-212ENST00000621990 TCP11X1B4DZS4 312 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 ERBB2P04626 1255 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 STAG3L1P0CL83 205 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 ETS1P14921 441 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 PHKA2P46019 1235 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 RAP1GAPP47736 663 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 OSTNP61366 133 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 PSMC1P62191 440 aaKnown RBP9.92□□□□□ -0.82
PDPN-212ENST00000621990 TNFAIP2Q03169 654 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 PTPN11Q06124 597 aaPredicted RBP9.92□□□□□ -0.82
PDPN-212ENST00000621990 ARHGAP1Q07960 439 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 TTLL4Q14679 1199 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 LRRC14Q15048 493 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 KYAT1Q16773 422 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 PPP1R21Q6ZMI0 780 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 ARHGEF18Q6ZSZ5 1173 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 TRABD2AQ86V40 505 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 ACSF2Q96CM8 615 aaPredicted RBP9.92□□□□□ -0.82
PDPN-212ENST00000621990 MAGEB18Q96M61 343 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 TWNKQ96RR1 684 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 ELAC2Q9BQ52 826 aaKnown RBP9.92□□□□□ -0.82
PDPN-212ENST00000621990 TMEM121Q9BTD3 319 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 PDZD7Q9H5P4 517 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 SLC40A1Q9NP59 571 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 LACTBL1A8MY62 500 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 FOXO6A8MYZ6 492 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 PRPF4O43172 522 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDPN-212ENST00000621990 DDNO94850 711 aaPredicted RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 GH1P01241 217 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 HMGCRP04035 888 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 KDELR1P24390 212 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 INCA1Q0VD86 236 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 CBLBQ13191 982 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 HADHQ16836 314 aaKnown RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 JADE1Q6IE81 842 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 TRPM8Q7Z2W7 1104 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 PIAS4Q8N2W9 510 aaPredicted RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 EMID1Q96A84 441 aaPredicted RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 TMEM176AQ96HP8 235 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 SGSM3Q96HU1 749 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ELOVL4Q9GZR5 314 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 SMYD3Q9H7B4 428 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDPN-212ENST00000621990 PRKAG3Q9UGI9 489 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 HMGXB4Q9UGU5 601 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 USP15Q9Y4E8 981 aaPredicted RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 EXOC1LA0A1B0GW35 172 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ASB14A6NK59 587 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 CD19P15391 556 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 PCK1P35558 622 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 GPD2P43304 727 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 CDH8P55286 799 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 FASTKD3Q14CZ7 662 aaKnown RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 R3HDM1Q15032 1099 aaKnown RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 ZFYVE27Q5T4F4 411 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ICE2Q659A1 982 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 CYP4F22Q6NT55 531 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 CENPUQ71F23 418 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 FASTKD5Q7L8L6 764 aaKnown RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 SRRM1Q8IYB3 904 aaKnown RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 NAT8LQ8N9F0 302 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ACTL9Q8TC94 416 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 DENND1AQ8TEH3 1009 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 DYDC1Q8WWB3 177 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ZBTB10Q96DT7 871 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 PDGFCQ9NRA1 345 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 FGFR1OP2Q9NVK5 253 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 SENP1Q9P0U3 644 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 SLC24A2Q9UI40 661 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 COL1A2P08123 1366 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 FAM47DPA6NHR8 397 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 RASA4BC9J798 803 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 E7ESA3 106 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 GOLGA8SH3BPF8 625 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 SGK1O00141 431 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 SMAPO00193 183 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 MAGEB2O15479 319 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 RASA4O43374 803 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 MICAL2O94851 1124 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ENDOD1O94919 500 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ITGB3P05106 788 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 KRT19P08727 400 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 OSBPP22059 807 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 OTUD4Q01804 1114 aaKnown RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 MYO1EQ12965 1108 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 LAMC2Q13753 1193 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 SLC10A6Q3KNW5 377 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 GALNTL6Q49A17 601 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ZC3H12AQ5D1E8 599 aaKnown RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 MAMDC4Q6UXC1 1216 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 RGS9BPQ6ZS82 235 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 CDR2LQ86X02 465 aaPredicted RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 PPIL6Q8IXY8 311 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms