RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ARHGAP15Q53QZ3 475 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 TDRD10Q5VZ19 366 aaKnown RBP19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 SPATA2LQ8IUW3 424 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 IRF7Q92985 503 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 CCDC47Q96A33 483 aaKnown RBP19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 E2F7Q96AV8 911 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 SLC46A2Q9BY10 475 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 TASP1Q9H6P5 420 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 LTB4R2Q9NPC1 389 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 MAGED2Q9UNF1 606 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 TRAF3IP3Q9Y228 551 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 PTPRDP23468 1912 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 GREB1Q4ZG55 1949 aa19.21■□□□□ 0.67
SCAMP4-213ENST00000621748 ZFHX2Q9C0A1 2572 aaPredicted RBP19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 ARNTLO00327 626 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 ZNF263O14978 683 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 PHACTR2O75167 634 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 TACC1O75410 805 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 PRAMEF12O95522 483 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 CSH1P0DML2 217 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 CSH2P0DML3 217 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 GNL1P36915 607 aaPredicted RBP19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 NLRP12P59046 1061 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 RPL10AP62906 217 aaKnown RBP19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 KCNB1Q14721 858 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 FMR1NBQ8N0W7 255 aaPredicted RBP19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 ELMO3Q96BJ8 720 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 FUBP3Q96I24 572 aaKnown RBP eCLIP19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 GCNAQ96QF7 691 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 TRPV5Q9NQA5 729 aa19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 NXF1Q9UBU9 619 aaKnown RBP19.2■□□□□ 0.66
SCAMP4-213ENST00000621748 SLC38A8A6NNN8 435 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 CALUO43852 315 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 VNN1O95497 513 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 FAM163BP0C2L3 166 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 TARSP26639 723 aaKnown RBP19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 WEE1P30291 646 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 ATICP31939 592 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 AP3M2P53677 418 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 TNNC1P63316 161 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 FCHO2Q0JRZ9 810 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 BIRC3Q13489 604 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 CEP135Q66GS9 1140 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 ZNF852Q6ZMS4 543 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 SCN4BQ8IWT1 228 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 OR6B3Q8NGW1 331 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 MYLPFQ96A32 169 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 SYAP1Q96A49 352 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 OSBPL6Q9BZF3 934 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 SMG9Q9H0W8 520 aaKnown RBP19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 SNX25Q9H3E2 840 aa19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 MAGEC2Q9UBF1 373 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 HOOK1Q9UJC3 728 aaKnown RBP19.19■□□□□ 0.66
SCAMP4-213ENST00000621748 CHADO15335 359 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 NOL4O94818 638 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 KIF20AO95235 890 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 BDNFP23560 247 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 MAGEA11P43364 429 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 FZD5Q13467 585 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 PNOCQ13519 176 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 NCOA4Q13772 614 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 MAPRE1Q15691 268 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 C1orf220Q5T0J3 134 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 C4orf50Q6ZRC1 276 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 YAF2Q8IY57 180 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 GUF1Q8N442 669 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 ENGASEQ8NFI3 743 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 MYCBPAPQ8TBZ2 947 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 TMC2Q8TDI7 906 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 PCED1BQ96HM7 432 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 DPEP3Q9H4B8 488 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 VRTNQ9H8Y1 702 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 FRMD4BQ9Y2L6 1034 aa19.18■□□□□ 0.66
SCAMP4-213ENST00000621748 ANAPC1Q9H1A4 1944 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 DPYSL4O14531 572 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 TADA3O75528 432 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 PTPN1P18031 435 aaKnown RBP19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 NR2F2P24468 414 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 NBL1P41271 181 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 CDH8P55286 799 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 CYP27A1Q02318 531 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 NFIL3Q16649 462 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 ZACNQ401N2 412 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 MDH1BQ5I0G3 518 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 TXNDC8Q6A555 127 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 C1orf210Q8IVY1 113 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 SMYD4Q8IYR2 804 aaPredicted RBP19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 CMTM8Q8IZV2 173 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 MAB21L3Q8N8X9 362 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 TRMT2BQ96GJ1 504 aaKnown RBP19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 ZFYVE19Q96K21 471 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 MYRFLQ96LU7 910 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 NELL2Q99435 816 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 SMYD3Q9H7B4 428 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 OBP2AQ9NY56 170 aa19.17■□□□□ 0.66
SCAMP4-213ENST00000621748 PROB1E7EW31 1015 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 KINO60870 393 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 AKAP3O75969 853 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 ZNF699Q32M78 642 aa19.16■□□□□ 0.66
SCAMP4-213ENST00000621748 VSTM1Q6UX27 236 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms