RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 HES6Q96HZ4 224 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 FAM210AQ96ND0 272 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 SENP7Q9BQF6 1050 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 TIPINQ9BVW5 301 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 SNTG2Q9NY99 539 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 IP6K2Q9UHH9 426 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 NEU2Q9Y3R4 380 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 MYO7AQ13402 2215 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 E2F8A0AVK6 867 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 A6NJR5 290 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 FARP2O94887 1054 aaPredicted RBP9.52□□□□□ -0.89
GGA3-222ENST00000621217 TBXAS1P24557 533 aaPredicted RBP9.52□□□□□ -0.89
GGA3-222ENST00000621217 RPL7AP62424 266 aaKnown RBP9.52□□□□□ -0.89
GGA3-222ENST00000621217 LAMB3Q13751 1172 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 RCN2Q14257 317 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 ACBD5Q5T8D3 534 aaPredicted RBP9.52□□□□□ -0.89
GGA3-222ENST00000621217 CENPUQ71F23 418 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 MCOLN2Q8IZK6 566 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 BEST2Q8NFU1 509 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 GPATCH2LQ9NWQ4 482 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 UMODL1Q5DID0 1318 aa9.52□□□□□ -0.89
GGA3-222ENST00000621217 GON4LQ3T8J9 2241 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 SDK1Q7Z5N4 2213 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 CCDC195A0A1B0GUA6 201 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 F8VP50 259 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 P4HA2O15460 535 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 MED7O43513 233 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 XPOTO43592 962 aaKnown RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 ADCY3O60266 1144 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 ARIH2O95376 493 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 TGFB3P10600 412 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 KITP10721 976 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 THPOP40225 353 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 PSMD7P51665 324 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 PHEXP78562 749 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 GRIK4Q16099 956 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 CLEC16AQ2KHT3 1053 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 LGSNQ5TDP6 509 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 ENOSF1Q7L5Y1 443 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 NIPA1Q7RTP0 329 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 PDIK1LQ8N165 341 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 SIX6OS1Q8N1H7 587 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 PPM1NQ8N819 430 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 MIEF2Q96C03 454 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 FAF2Q96CS3 445 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 RBM41Q96IZ5 413 aaKnown RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 FAM81BQ96LP2 452 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 UBXN6Q9BZV1 441 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 R3HDMLQ9H3Y0 253 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 PRMT7Q9NVM4 692 aaPredicted RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 FNDC3AQ9Y2H6 1198 aaKnown RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 PRG3Q9Y2Y8 225 aaPredicted RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 MYH11P35749 1972 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 CCDC78A2IDD5 438 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 SPECC1L-ADORA2AF8WAN1 911 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 MAGEB2O15479 319 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 ADSSP30520 456 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 GTF2BQ00403 316 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 LMNB2Q03252 620 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 SGSM1Q2NKQ1 1148 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 CELF3Q5SZQ8 465 aaKnown RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 LRIG3Q6UXM1 1119 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 ABHD15Q6UXT9 468 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 RFX8Q6ZV50 586 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 GPR142Q7Z601 462 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 TLK2Q86UE8 772 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 MAP4K3Q8IVH8 894 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 MAP7D3Q8IWC1 876 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 KIRREL3Q8IZU9 778 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 BBOF1Q8ND07 529 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 FEZF2Q8TBJ5 459 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 PLEKHO2Q8TD55 490 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 ZNF606Q8WXB4 792 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 C17orf75Q9HAS0 396 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 ETNK1Q9HBU6 452 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 XAB2Q9HCS7 855 aaKnown RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 METTL5Q9NRN9 209 aaKnown RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 SYNPO2Q9UMS6 1093 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 CHMP2BQ9UQN3 213 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 DHX15O43143 795 aaKnown RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 MT-ND3P03897 115 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 CALB1P05937 261 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 GZMAP12544 262 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 PHBP35232 272 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 JAM2P57087 298 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 DNAJC3Q13217 504 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 TEKT4Q8WW24 435 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 MBOAT7Q96N66 472 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 TINF2Q9BSI4 451 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 SLC13A1Q9BZW2 595 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 NIF3L1Q9GZT8 377 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 SIK2Q9H0K1 926 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 NOD2Q9HC29 1040 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 CISHQ9NSE2 258 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 ETAA1Q9NY74 926 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 G3BP2Q9UN86 482 aaKnown RBP9.51□□□□□ -0.89
GGA3-222ENST00000621217 ZMYM2Q9UBW7 1377 aa9.51□□□□□ -0.89
GGA3-222ENST00000621217 BANF1O75531 89 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms