RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 GZF1Q9H116 711 aaPredicted RBP21.96■■□□□ 1.11
SMC6-210ENST00000621152 SNX25Q9H3E2 840 aa21.96■■□□□ 1.11
SMC6-210ENST00000621152 LMAN1LQ9HAT1 526 aa21.96■■□□□ 1.11
SMC6-210ENST00000621152 CACNA1HO95180 2353 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 SLC38A8A6NNN8 435 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 PRAMEF12O95522 483 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 MYL1P05976 194 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 RPS9P46781 194 aaKnown RBP21.95■■□□□ 1.1
SMC6-210ENST00000621152 CASP4P49662 377 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 CFAP221Q4G0U5 840 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 TXNDC8Q6A555 127 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 C4orf50Q6ZRC1 276 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 CELF5Q8N6W0 485 aaKnown RBP21.95■■□□□ 1.1
SMC6-210ENST00000621152 TTC8Q8TAM2 541 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 MRPS31Q92665 395 aaKnown RBP21.95■■□□□ 1.1
SMC6-210ENST00000621152 FUBP3Q96I24 572 aaKnown RBP eCLIP21.95■■□□□ 1.1
SMC6-210ENST00000621152 CRTAC1Q9NQ79 661 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 DMAC2Q9NW81 257 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 ZMYM5Q9UJ78 669 aa21.95■■□□□ 1.1
SMC6-210ENST00000621152 FAM237AA0A1B0GTK4 181 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 RPN1P04843 607 aaKnown RBP21.94■■□□□ 1.1
SMC6-210ENST00000621152 FAM163BP0C2L3 166 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 DDX6P26196 483 aaKnown RBP eCLIP21.94■■□□□ 1.1
SMC6-210ENST00000621152 MLLT6P55198 1093 aaPredicted RBP21.94■■□□□ 1.1
SMC6-210ENST00000621152 MYL6P60660 151 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 TNNC1P63316 161 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 CSTF1Q05048 431 aaKnown RBP21.94■■□□□ 1.1
SMC6-210ENST00000621152 ZNF687Q8N1G0 1237 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 FSIP1Q8NA03 581 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 OR6B3Q8NGW1 331 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 PLEKHO2Q8TD55 490 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 SEMA4AQ9H3S1 761 aa21.94■■□□□ 1.1
SMC6-210ENST00000621152 C8orf33Q9H7E9 229 aaPredicted RBP21.94■■□□□ 1.1
SMC6-210ENST00000621152 THG1LQ9NWX6 298 aaKnown RBP21.94■■□□□ 1.1
SMC6-210ENST00000621152 UXTQ9UBK9 157 aaPredicted RBP21.94■■□□□ 1.1
SMC6-210ENST00000621152 NXF1Q9UBU9 619 aaKnown RBP21.94■■□□□ 1.1
SMC6-210ENST00000621152 PDXKO00764 312 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 TACC1O75410 805 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 NOL4O94818 638 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 BDNFP23560 247 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 AVPR1AP37288 418 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 GRIK1P39086 918 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 MAGEA11P43364 429 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 SOX9P48436 509 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 CYP27A1Q02318 531 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 MAPRE1Q15691 268 aaKnown RBP21.93■■□□□ 1.1
SMC6-210ENST00000621152 MON1AQ86VX9 555 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 MYCBPAPQ8TBZ2 947 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 PARD3BQ8TEW8 1205 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 MYLPFQ96A32 169 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 CCDC47Q96A33 483 aaKnown RBP21.93■■□□□ 1.1
SMC6-210ENST00000621152 MYRFLQ96LU7 910 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 KCTD10Q9H3F6 313 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 GKN1Q9NS71 199 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 GTSE1Q9NYZ3 720 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 FBXO4Q9UKT5 387 aa21.93■■□□□ 1.1
SMC6-210ENST00000621152 A0A1W2PQ27 194 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 A0A1W2PQ64 194 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 A0A1W2PQD8 194 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 SOBPA7XYQ1 873 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 PRR29P0C7W0 189 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 ATICP31939 592 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 AP3M2P53677 418 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 MTAPQ13126 283 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 BIRC3Q13489 604 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 ZC3H14Q6PJT7 736 aaKnown RBP21.92■■□□□ 1.1
SMC6-210ENST00000621152 SLC9A9Q8IVB4 645 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 ADSSL1Q8N142 457 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 USP13Q92995 863 aaPredicted RBP21.92■■□□□ 1.1
SMC6-210ENST00000621152 SYAP1Q96A49 352 aaPredicted RBP21.92■■□□□ 1.1
SMC6-210ENST00000621152 GDPD2Q9HCC8 539 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 NME7Q9Y5B8 376 aa21.92■■□□□ 1.1
SMC6-210ENST00000621152 LRRIQ3A6PVS8 624 aaPredicted RBP21.91■■□□□ 1.1
SMC6-210ENST00000621152 STAU1O95793 577 aaKnown RBP21.91■■□□□ 1.1
SMC6-210ENST00000621152 LMNAP02545 664 aaKnown RBP21.91■■□□□ 1.1
SMC6-210ENST00000621152 C4BPAP04003 597 aaKnown RBP21.91■■□□□ 1.1
SMC6-210ENST00000621152 NR3C1P04150 777 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 PTPN1P18031 435 aaKnown RBP21.91■■□□□ 1.1
SMC6-210ENST00000621152 PLCB2Q00722 1185 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 TNK2Q07912 1038 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 ZNF528Q3MIS6 628 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 MDH1BQ5I0G3 518 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 VSTM1Q6UX27 236 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 KRBA2Q6ZNG9 492 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 TRMT2BQ96GJ1 504 aaKnown RBP21.91■■□□□ 1.1
SMC6-210ENST00000621152 MSANTD3Q96H12 275 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 PCED1BQ96HM7 432 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 XYLT2Q9H1B5 865 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 TDP1Q9NUW8 608 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 CCL26Q9Y258 94 aa21.91■■□□□ 1.1
SMC6-210ENST00000621152 SPECC1L-ADORA2AF8WAN1 911 aa21.9■■□□□ 1.1
SMC6-210ENST00000621152 CLSTN1O94985 981 aa21.9■■□□□ 1.1
SMC6-210ENST00000621152 ZNF202O95125 648 aa21.9■■□□□ 1.1
SMC6-210ENST00000621152 CHRNB1P11230 501 aa21.9■■□□□ 1.1
SMC6-210ENST00000621152 CDH8P55286 799 aa21.9■■□□□ 1.1
SMC6-210ENST00000621152 CLDN10P78369 228 aa21.9■■□□□ 1.1
SMC6-210ENST00000621152 TDRD10Q5VZ19 366 aaKnown RBP21.9■■□□□ 1.1
SMC6-210ENST00000621152 CEP135Q66GS9 1140 aa21.9■■□□□ 1.1
SMC6-210ENST00000621152 C1orf228Q6PIY5 440 aa21.9■■□□□ 1.1
SMC6-210ENST00000621152 TSSK4Q6SA08 328 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms