RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 RARAP10276 462 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 RAG1P15918 1043 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 CYP4A22Q5TCH4 519 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 CYB5D1Q6P9G0 228 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 C6orf89Q6UWU4 347 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 DEPDC1BQ8WUY9 529 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 SEC14L1Q92503 715 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 WNT8AQ9H1J5 351 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 SP110Q9HB58 689 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 CACYBPQ9HB71 228 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 KCND2Q9NZV8 630 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 CCDC195A0A1B0GUA6 201 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 CASTOR2A6NHX0 329 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 IRF6O14896 467 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 ATP8B3O60423 1300 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 S100BP04271 92 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 APRTP07741 180 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 PRAMEP78395 509 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 TWF1Q12792 350 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 ZBTB41Q5SVQ8 909 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 C11orf63Q6NUN7 778 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 PARP9Q8IXQ6 854 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 APPL2Q8NEU8 664 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 IL31RAQ8NI17 732 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 LMO3Q8TAP4 145 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 MAML1Q92585 1016 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 CLMNQ96JQ2 1002 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 GRHL1Q9NZI5 618 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 SFMBT1Q9UHJ3 866 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 BAG5Q9UL15 447 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 RPTORQ8N122 1335 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 APOEP02649 317 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 SERPIND1P05546 499 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 SERPINB6P35237 376 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 RARRES1P49788 294 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 KRT17Q04695 432 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 DRP2Q13474 957 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 CXCL17Q6UXB2 119 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 TBC1D1Q86TI0 1168 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 ZDHHC14Q8IZN3 488 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 OLIG1Q8TAK6 271 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 TLCD1Q96CP7 247 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 MOV10L1Q9BXT6 1211 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 KIAA1586Q9HCI6 787 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 HPS4Q9NQG7 708 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 SMPD4Q9NXE4 827 aa8.67□□□□□ -1.02
PTPDC1-204ENST00000620992 A0A087WZ62 844 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 FOXO6A8MYZ6 492 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 H3BRB1 525 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 CKMP06732 381 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 PLS3P13797 630 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 AKAP5P24588 427 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 PTGIRP43119 386 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 FCGRTP55899 365 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 TMEM259Q4ZIN3 620 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 PLEKHH3Q7Z736 793 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 ANKMY2Q8IV38 441 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 KCTD17Q8N5Z5 321 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SH3TC2Q8TF17 1288 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 COPS5Q92905 334 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 YME1L1Q96TA2 773 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 FDXACB1Q9BRP7 624 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SYT11Q9BT88 431 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 TUT1Q9H6E5 874 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 STARD7Q9NQZ5 370 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 NUDT5Q9UKK9 219 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 TMX2Q9Y320 296 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SRRM3A6NNA2 597 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 RIPK2O43353 540 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 AGTP01019 485 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 HLA-DRAP01903 254 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 ADRB2P07550 413 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 NUDT17P0C025 328 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 GARSP41250 739 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 YWHAHQ04917 246 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 ALCAMQ13740 583 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 NFIL3Q16649 462 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 DAB2IPQ5VWQ8 1189 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 HEATR6Q6AI08 1181 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 FUKQ8N0W3 1084 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 SH3KBP1Q96B97 665 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 KREMEN1Q96MU8 473 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 APOL5Q9BWW9 433 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 MTIF3Q9H2K0 278 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 EPB41L4BQ9H329 900 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 ZNF831Q5JPB2 1677 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 ICE1Q9Y2F5 2266 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 CCT8L1PA6NM43 557 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 DNAJC6O75061 913 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 CYP11B1P15538 503 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 BRD2P25440 801 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 EFNA5P52803 228 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 ZNF235Q14590 738 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 TKFCQ3LXA3 575 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 EFHC2Q5JST6 749 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 FAXCQ5TGI0 409 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 NUGGCQ68CJ6 796 aa8.66□□□□□ -1.02
PTPDC1-204ENST00000620992 POTEAQ6S8J7 498 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms