RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 FAM111AQ96PZ2 611 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 TMEM106CQ9BVX2 250 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 KCNMB3Q9NPA1 279 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 TAS2R14Q9NYV8 317 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 PCDHA3Q9Y5H8 950 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 ASTN1O14525 1302 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 FRMPD4Q14CM0 1322 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 RARAP10276 462 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
ALMS1-208ENST00000620466 PYGBP11216 843 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 CAP2P40123 477 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 KLC1Q07866 573 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 LRRC36Q1X8D7 754 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 TFDP3Q5H9I0 405 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 DAB2IPQ5VWQ8 1189 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 NLRP9Q7RTR0 991 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 IRF2BP1Q8IU81 584 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 ARHGAP18Q8N392 663 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 CASS4Q9NQ75 786 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.71□□□□□ -1.02
ALMS1-208ENST00000620466 SHBGP04278 402 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MYBPC2Q14324 1141 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 VEPH1Q14D04 833 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 CCNG2Q16589 344 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 BTBD8Q5XKL5 378 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 XRRA1Q6P2D8 792 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 ANKS3Q6ZW76 656 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 SEPT1Q8WYJ6 367 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 PIK3R5Q8WYR1 880 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 SRPK1Q96SB4 655 aaKnown RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 RXFP1Q9HBX9 757 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MRPL40Q9NQ50 206 aaKnown RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 NAALADL1Q9UQQ1 740 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 TMX2Q9Y320 296 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 SNX9Q9Y5X1 595 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 NID2Q14112 1375 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 FSBPO95073 299 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 TXNP10599 105 aaKnown RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 SYTL3Q4VX76 610 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 KCNT1Q5JUK3 1230 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 SPDYCQ5MJ68 293 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 KCNV1Q6PIU1 500 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 RNF135Q8IUD6 432 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MCOLN2Q8IZK6 566 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 CGRRF1Q99675 332 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 PIK3CDO00329 1044 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 RBP3P10745 1247 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 GARTP22102 1010 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 RAP1GAPP47736 663 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 TMEM259Q4ZIN3 620 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 EXD1Q8NHP7 514 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 CEP70Q8NHQ1 597 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 AGAP3Q96P47 875 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 EPAS1Q99814 870 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 TMEM121Q9BTD3 319 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MTMR12Q9C0I1 747 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MYOZ2Q9NPC6 264 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 STX18Q9P2W9 335 aaKnown RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 HEY2Q9UBP5 337 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 NFIBO00712 420 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MYO1DO94832 1006 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 DLG4P78352 724 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 GTF2H3Q13889 308 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MORF4L2Q15014 288 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 STILQ15468 1287 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 FASTKD1Q53R41 847 aaKnown RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 RNF168Q8IYW5 571 aaPredicted RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 NR1H4Q96RI1 486 aaPredicted RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 PXMP2Q9NR77 195 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 TMEM51Q9NW97 253 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 NINJ2Q9NZG7 142 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 NCANO14594 1321 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 TRIM49D1C9J1S8 452 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MROH9Q5TGP6 573 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 MREGQ8N565 214 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 PPHLN1Q8NEY8 458 aaKnown RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 FRMD8P1Q9BZ68 369 aaPredicted RBP8.7□□□□□ -1.02
ALMS1-208ENST00000620466 FAM49BQ9NUQ9 324 aa8.7□□□□□ -1.02
ALMS1-208ENST00000620466 C19orf81C9J6K1 198 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 UBTFL6P0CB48 400 aaPredicted RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 VHLP40337 213 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TPI1P60174 286 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 OTUD4Q01804 1114 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 RARS2Q5T160 578 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TTC23LQ6PF05 361 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 ZFPM1Q8IX07 1006 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 C4orf19Q8IY42 314 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 PAFAH2Q99487 392 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 PLEKHA5Q9HAU0 1116 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 ASB14A6NK59 587 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 HNRNPH3P31942 346 aaKnown RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 PRKCIP41743 596 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 KCTD19Q17RG1 926 aaPredicted RBP8.69□□□□□ -1.02
ALMS1-208ENST00000620466 FAXCQ5TGI0 409 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 ZNF560Q96MR9 790 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 SFMBT1Q9UHJ3 866 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 TOPAZ1Q8N9V7 1692 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 ENO4A6NNW6 628 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 ITGB3P05106 788 aa8.69□□□□□ -1.02
ALMS1-208ENST00000620466 EFCAB12Q6NXP0 572 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms