RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 OLFML2BQ68BL8 750 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 SATL1Q86VE3 508 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 CPNE8Q86YQ8 564 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 CDAN1Q8IWY9 1227 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ETNPPLQ8TBG4 499 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 TCP10LQ8TDR4 215 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ZFRQ96KR1 1074 aaKnown RBP11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ARHGEF4Q9NR80 690 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 CLIC5Q9NZA1 410 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 THEGQ9P2T0 379 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 TAGLN3Q9UI15 199 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ANAPC7Q9UJX3 599 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 PLA2G4CQ9UP65 541 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 SHOC2Q9UQ13 582 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 WDR37Q9Y2I8 494 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 R3HDM2Q9Y2K5 976 aaKnown RBP11.34□□□□□ -0.59
UPF3A-212ENST00000619079 PLIN4Q96Q06 1357 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ARHGAP10A1A4S6 786 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 WDR91A4D1P6 747 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 CAPN14A8MX76 684 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 KLF11O14901 512 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ZBTB5O15062 677 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 CELF2O95319 508 aaKnown RBP11.34□□□□□ -0.59
UPF3A-212ENST00000619079 SGPL1O95470 568 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 VCLP18206 1134 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ADARP55265 1226 aaKnown RBP11.34□□□□□ -0.59
UPF3A-212ENST00000619079 AP3B2Q13367 1082 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 PRKD1Q15139 912 aaPredicted RBP11.34□□□□□ -0.59
UPF3A-212ENST00000619079 LLGL1Q15334 1064 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 CCDC142Q17RM4 750 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 CLEC16AQ2KHT3 1053 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 MMEL1Q495T6 779 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ANKRD20A4Q4UJ75 823 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 C1orf228Q6PIY5 440 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 PASD1Q8IV76 773 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 MAP7D3Q8IWC1 876 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ADGRF4Q8IZF3 695 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 BANPQ8N9N5 519 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 ZBTB8BQ8NAP8 495 aaPredicted RBP11.34□□□□□ -0.59
UPF3A-212ENST00000619079 RBM15BQ8NDT2 890 aaKnown RBP11.34□□□□□ -0.59
UPF3A-212ENST00000619079 JADE3Q92613 823 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 TRIM11Q96F44 468 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 AGBL1Q96MI9 1066 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 S100A14Q9HCY8 104 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 TBCCD1Q9NVR7 557 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 PLK2Q9NYY3 685 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 SLC7A8Q9UHI5 535 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 SH3GLB1Q9Y371 365 aa11.34□□□□□ -0.59
UPF3A-212ENST00000619079 IPO5O00410 1097 aaKnown RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PSTPIP1O43586 416 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 MYL2P10916 166 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 RALAP11233 206 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ADSSP30520 456 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 MFAP3P55082 362 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ARL4CP56559 192 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 FMO1Q01740 532 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 CDK18Q07002 472 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 FSTL1Q12841 308 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PDK3Q15120 406 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 EPC2Q52LR7 807 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ACAD10Q6JQN1 1059 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 RAPH1Q70E73 1250 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ARHGEF19Q8IW93 802 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PRICKLE1Q96MT3 831 aaPredicted RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 CYTH2Q99418 400 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 THTPAQ9BU02 230 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 NMUR2Q9GZQ4 415 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 IQCGQ9H095 443 aaKnown RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 Q9H521 79 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 AVENQ9NQS1 362 aaPredicted RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 BTBD7Q9P203 1132 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PPM1HQ9ULR3 514 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 EMSYQ7Z589 1322 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PEX1O43933 1283 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 GRIA2P42262 883 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 SERPINB8P50452 374 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ZNF543Q08ER8 600 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PDIA2Q13087 525 aaKnown RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 GPATCH4Q5T3I0 446 aaKnown RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 NSMFQ6X4W1 530 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 FAM178BQ8IXR5 827 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ZBED8Q8IZ13 594 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ATP11CQ8NB49 1132 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 DIS3LQ8TF46 1054 aaKnown RBP11.33□□□□□ -0.6
UPF3A-212ENST00000619079 WWP1Q9H0M0 922 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 GPCPD1Q9NPB8 672 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 MTMR4Q9NYA4 1195 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PI4KBQ9UBF8 816 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 ZNF232Q9UNY5 417 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 DMTF1Q9Y222 760 aa11.33□□□□□ -0.6
UPF3A-212ENST00000619079 PMM2O15305 246 aa11.32□□□□□ -0.6
UPF3A-212ENST00000619079 ZNF862O60290 1169 aa11.32□□□□□ -0.6
UPF3A-212ENST00000619079 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
UPF3A-212ENST00000619079 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms