RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 FETUBQ9UGM5 382 aa21.42■■□□□ 1.02
NEK3-208ENST00000618534 CORO1CQ9ULV4 474 aaPredicted RBP21.42■■□□□ 1.02
NEK3-208ENST00000618534 TCRBV7S3A2A0A539 114 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 LSM8O95777 96 aaKnown RBP21.41■■□□□ 1.02
NEK3-208ENST00000618534 RFWD3Q6PCD5 774 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
NEK3-208ENST00000618534 WDTC1Q8N5D0 677 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 TMEM35BQ8NCS4 154 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 ZNF398Q8TD17 642 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 DCAKDQ8WVC6 231 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 PTPRN2Q92932 1015 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 OSBPL1AQ9BXW6 950 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 IMPG2Q9BZV3 1241 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 ZWILCHQ9H900 591 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 SAR1AQ9NR31 198 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 LDHAP00338 332 aaKnown RBP21.41■■□□□ 1.02
NEK3-208ENST00000618534 BANPQ8N9N5 519 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 ZNF277Q9NRM2 450 aaPredicted RBP21.41■■□□□ 1.02
NEK3-208ENST00000618534 ADGRA2Q96PE1 1338 aa21.41■■□□□ 1.02
NEK3-208ENST00000618534 TMEM63AO94886 807 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 MARK3P27448 753 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 RPL22P35268 128 aaKnown RBP21.4■■□□□ 1.02
NEK3-208ENST00000618534 PTDSS1P48651 473 aaKnown RBP21.4■■□□□ 1.02
NEK3-208ENST00000618534 KLHL38Q2WGJ6 581 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 KCNT1Q5JUK3 1230 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 NIPA2Q8N8Q9 360 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 ZNF526Q8TF50 670 aaPredicted RBP21.4■■□□□ 1.02
NEK3-208ENST00000618534 PORCNQ9H237 461 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 SIP14410 1827 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 A0A0G2JND7 137 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 TM9SF1O15321 606 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 CST8O60676 142 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 ASS1P00966 412 aaKnown RBP21.4■■□□□ 1.02
NEK3-208ENST00000618534 ATP4AP20648 1035 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 GCKP35557 465 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 NAMPTP43490 491 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 CCNHP51946 323 aaPredicted RBP21.4■■□□□ 1.02
NEK3-208ENST00000618534 BBS9Q3SYG4 887 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 CDCA2Q69YH5 1023 aaPredicted RBP21.4■■□□□ 1.02
NEK3-208ENST00000618534 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.4■■□□□ 1.02
NEK3-208ENST00000618534 MANSC1Q9H8J5 431 aa21.4■■□□□ 1.02
NEK3-208ENST00000618534 WNT10BO00744 389 aa21.39■■□□□ 1.02
NEK3-208ENST00000618534 SUPT20HL2P0C7V6 817 aa21.39■■□□□ 1.02
NEK3-208ENST00000618534 IL1R2P27930 398 aa21.39■■□□□ 1.02
NEK3-208ENST00000618534 TGFB2P61812 414 aa21.39■■□□□ 1.02
NEK3-208ENST00000618534 SUPT20HL1Q3ZLR7 823 aa21.39■■□□□ 1.02
NEK3-208ENST00000618534 ZC3H12AQ5D1E8 599 aaKnown RBP21.39■■□□□ 1.02
NEK3-208ENST00000618534 TFAP2BQ92481 460 aa21.39■■□□□ 1.02
NEK3-208ENST00000618534 CADM1Q9BY67 442 aaKnown RBP21.39■■□□□ 1.02
NEK3-208ENST00000618534 CISHQ9NSE2 258 aa21.39■■□□□ 1.02
NEK3-208ENST00000618534 ARL8BQ9NVJ2 186 aa21.39■■□□□ 1.02
NEK3-208ENST00000618534 A6NHS1 94 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 E7ESA3 106 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 PSMA2P25787 234 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 RFC1P35251 1148 aaPredicted RBP21.39■■□□□ 1.01
NEK3-208ENST00000618534 TNFSF9P41273 254 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 MYL6P60660 151 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 SLC25A11Q02978 314 aaKnown RBP21.39■■□□□ 1.01
NEK3-208ENST00000618534 TAP1Q03518 808 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 ANO7Q6IWH7 933 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 LRRC6Q86X45 466 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 PALM2Q8IXS6 379 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 ARFGAP1Q8N6T3 406 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 MTMR14Q8NCE2 650 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 NSUN6Q8TEA1 469 aaKnown RBP21.39■■□□□ 1.01
NEK3-208ENST00000618534 FBXO41Q8TF61 875 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 PHACTR1Q9C0D0 580 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 GINM1Q9NU53 330 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 ZFATQ9P243 1243 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 HEY2Q9UBP5 337 aa21.39■■□□□ 1.01
NEK3-208ENST00000618534 ATP6V1C1P21283 382 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 PCK1P35558 622 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 SNRNP48Q6IEG0 339 aaKnown RBP21.38■■□□□ 1.01
NEK3-208ENST00000618534 C4orf50Q6ZRC1 276 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 POLNQ7Z5Q5 900 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 TEX9Q8N6V9 391 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 SH3TC2Q8TF17 1288 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 RSAD2Q8WXG1 361 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 MTMR12Q9C0I1 747 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 VPS11Q9H270 941 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 TJP2Q9UDY2 1190 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 RPL26L1Q9UNX3 145 aaKnown RBP21.38■■□□□ 1.01
NEK3-208ENST00000618534 CFAP69A5D8W1 941 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 TTLL13PA6NNM8 815 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 HAUS5O94927 633 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 SCARA5Q6ZMJ2 495 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 EP400NLQ6ZTU2 488 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 UNC45BQ8IWX7 931 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 JOSD2Q8TAC2 188 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 PRR11Q96HE9 360 aaPredicted RBP21.38■■□□□ 1.01
NEK3-208ENST00000618534 TSSK1BQ9BXA7 367 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 TRIM55Q9BYV6 548 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 DHX33Q9H6R0 707 aaKnown RBP21.38■■□□□ 1.01
NEK3-208ENST00000618534 XPO7Q9UIA9 1087 aaKnown RBP21.38■■□□□ 1.01
NEK3-208ENST00000618534 KCNG1Q9UIX4 513 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 CHMP2BQ9UQN3 213 aa21.38■■□□□ 1.01
NEK3-208ENST00000618534 HNRNPCL1O60812 293 aaKnown RBP21.37■■□□□ 1.01
NEK3-208ENST00000618534 LRCH4O75427 683 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 STAM2O75886 525 aa21.37■■□□□ 1.01
NEK3-208ENST00000618534 APBA3O96018 575 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms