RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.37
SRRT-216ENST00000618262 NDEL1Q9GZM8 345 aa12.71□□□□□ -0.37
SRRT-216ENST00000618262 CXCL16Q9H2A7 254 aa12.71□□□□□ -0.37
SRRT-216ENST00000618262 CLK4Q9HAZ1 481 aaKnown RBP12.71□□□□□ -0.37
SRRT-216ENST00000618262 NOP53Q9NZM5 478 aaKnown RBP12.71□□□□□ -0.37
SRRT-216ENST00000618262 C5orf42Q9H799 3197 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 A0A1W2PQ67 120 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 RRN3P2A6NIE6 340 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 N4BP3O15049 544 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 MAGEB2O15479 319 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 INMTO95050 263 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 PRKCBP05771 671 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.385e-6■■■□□ 15.1
SRRT-216ENST00000618262 ADAM17P78536 824 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 STIM1Q13586 685 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 TUBA3CQ13748 450 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.38
SRRT-216ENST00000618262 SLC39A5Q6ZMH5 540 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 P2RX5Q93086 422 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 CCSER2Q9H7U1 834 aa12.71□□□□□ -0.38
SRRT-216ENST00000618262 PIN4Q9Y237 131 aaKnown RBP12.71□□□□□ -0.38
SRRT-216ENST00000618262 NOC2LQ9Y3T9 749 aaKnown RBP12.71□□□□□ -0.38
SRRT-216ENST00000618262 VCANP13611 3396 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 MAPTP10636 758 aaKnown RBP12.7□□□□□ -0.38
SRRT-216ENST00000618262 ITGB8P26012 769 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
SRRT-216ENST00000618262 MXI1P50539 228 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 ADAM9Q13443 819 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 MAPK6Q16659 721 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 DCAF17Q5H9S7 520 aaPredicted RBP12.7□□□□□ -0.38
SRRT-216ENST00000618262 NEPROQ6NW34 567 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 MLKLQ8NB16 471 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 HNRNPABQ99729 332 aaKnown RBP12.7□□□□□ -0.38
SRRT-216ENST00000618262 FAM213AQ9BRX8 229 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 HAPLN2Q9GZV7 340 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 VPS16Q9H269 839 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 ZMYM2Q9UBW7 1377 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 MEIS3P2A8K0S8 358 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 ACSL4O60488 711 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 GPR32O75388 356 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 ATP6V1G2O95670 118 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 ADSSP30520 456 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 TNFSF9P41273 254 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 USP46P62068 366 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 MXD4Q14582 209 aaPredicted RBP12.7□□□□□ -0.38
SRRT-216ENST00000618262 CCDC153Q494R4 210 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 ARMCX5Q6P1M9 558 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 SLC39A4Q6P5W5 647 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 SRGAP1Q7Z6B7 1085 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 KLK14Q9P0G3 267 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 MYH11P35749 1972 aa12.7□□□□□ -0.38
SRRT-216ENST00000618262 MBLAC1A4D2B0 266 aaPredicted RBP12.69□□□□□ -0.38
SRRT-216ENST00000618262 A6NNZ2 444 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 KPNA6O60684 536 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 CKBP12277 381 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 GAP43P17677 238 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 CD9P21926 228 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 NAMPTP43490 491 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 TUBB8Q3ZCM7 444 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 SCARA3Q6AZY7 606 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 SERINC5Q86VE9 423 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ZBTB8OSQ8IWT0 167 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 VCX3AQ9NNX9 186 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 OLFML3Q9NRN5 406 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 TAB2Q9NYJ8 693 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 KCND2Q9NZV8 630 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 CACNG4Q9UBN1 327 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 RAB21Q9UL25 225 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 EXOC3O60645 756 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ACRP10323 421 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ARF4P18085 180 aaPredicted RBP12.69□□□□□ -0.38
SRRT-216ENST00000618262 AKAP5P24588 427 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 KCNJ6P48051 423 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 CD97P48960 835 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 MTTPP55157 894 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 GSDMDP57764 484 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 GNGT1P63211 74 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 DR1Q01658 176 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 MBTD1Q05BQ5 628 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 SP140Q13342 867 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 NCAPHQ15003 741 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 SNX17Q15036 470 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 DSTYKQ6XUX3 929 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 CBWD2Q8IUF1 395 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 C11orf49Q9H6J7 331 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 PPCSQ9HAB8 311 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ABCB6Q9NP58 842 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 HAUS2Q9NVX0 235 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 ZMYND8Q9ULU4 1186 aaPredicted RBP12.69□□□□□ -0.38
SRRT-216ENST00000618262 M0QZ92 97 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 AP3B1O00203 1094 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 DLATP10515 647 aaKnown RBP12.69□□□□□ -0.38
SRRT-216ENST00000618262 NCKAP1LP55160 1127 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 RTP1P59025 263 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 MYL5Q02045 173 aa12.69□□□□□ -0.38
SRRT-216ENST00000618262 APBA1Q02410 837 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms