RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 BTBD6Q96KE9 485 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 BCO2Q9BYV7 579 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 SDCBP2Q9H190 292 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 CNOT8Q9UFF9 292 aaKnown RBP21.72■■□□□ 1.07
SDHA-220ENST00000617470 FAN1Q9Y2M0 1017 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 F8W810 466 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 PIRO00625 290 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 NRP1O14786 923 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 THAP12O43422 761 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 RASGEF1CQ8N431 466 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 HNRNPLLQ8WVV9 542 aaKnown RBP21.72■■□□□ 1.07
SDHA-220ENST00000617470 ZNF560Q96MR9 790 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 UVRAGQ9P2Y5 699 aa21.72■■□□□ 1.07
SDHA-220ENST00000617470 NXF1Q9UBU9 619 aaKnown RBP21.72■■□□□ 1.07
SDHA-220ENST00000617470 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.71■■□□□ 1.07
SDHA-220ENST00000617470 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.71■■□□□ 1.07
SDHA-220ENST00000617470 CEP104O60308 925 aa21.71■■□□□ 1.07
SDHA-220ENST00000617470 GALTP07902 379 aa21.71■■□□□ 1.07
SDHA-220ENST00000617470 IGFBP6P24592 240 aaPredicted RBP21.71■■□□□ 1.07
SDHA-220ENST00000617470 MRPS25P82663 173 aaKnown RBP21.71■■□□□ 1.07
SDHA-220ENST00000617470 C2CD6Q53TS8 623 aa21.71■■□□□ 1.07
SDHA-220ENST00000617470 LLGL2Q6P1M3 1020 aa21.71■■□□□ 1.07
SDHA-220ENST00000617470 TRIM72Q6ZMU5 477 aa21.71■■□□□ 1.07
SDHA-220ENST00000617470 C3orf58Q8NDZ4 430 aa21.71■■□□□ 1.07
SDHA-220ENST00000617470 ALG3Q92685 438 aa21.71■■□□□ 1.07
SDHA-220ENST00000617470 RRM1P23921 792 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 RAP1GAPP47736 663 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 TAF6P49848 677 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 PTP4A2Q12974 167 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 MESDQ14696 234 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 WDR72Q3MJ13 1102 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 ZNF394Q53GI3 561 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 DCLRE1AQ6PJP8 1040 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 LRRC52Q8N7C0 313 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 TMEM175Q9BSA9 504 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 VRTNQ9H8Y1 702 aa21.7■■□□□ 1.07
SDHA-220ENST00000617470 AVENQ9NQS1 362 aaPredicted RBP21.7■■□□□ 1.07
SDHA-220ENST00000617470 DMGDHQ9UI17 866 aaKnown RBP21.7■■□□□ 1.07
SDHA-220ENST00000617470 TMEM110-MUSTN1A8MSY1 372 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 TADA2AO75478 443 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 ZMYND10O75800 440 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 LAG3P18627 525 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 COMTP21964 271 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 ATICP31939 592 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 PNPLA4P41247 253 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 CDH8P55286 799 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 BEND6Q5SZJ8 279 aaPredicted RBP21.7■■□□□ 1.06
SDHA-220ENST00000617470 KCNT2Q6UVM3 1135 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 TFAP2BQ92481 460 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 CD101Q93033 1021 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 ZNF558Q96NG5 402 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 COLEC11Q9BWP8 271 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 ARFGAP3Q9NP61 516 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 FAM53CQ9NYF3 392 aa21.7■■□□□ 1.06
SDHA-220ENST00000617470 ITGB1P05556 798 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 TUBBP07437 444 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 BRD2P25440 801 aaKnown RBP21.69■■□□□ 1.06
SDHA-220ENST00000617470 PBX2P40425 430 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 NSFP46459 744 aaKnown RBP21.69■■□□□ 1.06
SDHA-220ENST00000617470 MARCKSL1P49006 195 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 LILRA4P59901 499 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 SV2CQ496J9 727 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 ZNF667Q5HYK9 610 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 PHF13Q86YI8 300 aaPredicted RBP21.69■■□□□ 1.06
SDHA-220ENST00000617470 SP7Q8TDD2 431 aaPredicted RBP21.69■■□□□ 1.06
SDHA-220ENST00000617470 KRT35Q92764 455 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 SELENOOQ9BVL4 669 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 TRIM7Q9C029 511 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 AAASQ9NRG9 546 aa21.69■■□□□ 1.06
SDHA-220ENST00000617470 SPTLC1O15269 473 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 SASH3O75995 380 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 CA3P07451 260 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 LONRF2Q1L5Z9 754 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 SMYD5Q6GMV2 418 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 PHLDB2Q86SQ0 1253 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 COLGALT1Q8NBJ5 622 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 WHAMMQ8TF30 809 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 FAXDC2Q96IV6 333 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 SMYD3Q9H7B4 428 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 PCDHA11Q9Y5I1 949 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 SNX9Q9Y5X1 595 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 KPNA7A9QM74 516 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 I3L4J1 428 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 PGRMC1O00264 195 aaKnown RBP21.68■■□□□ 1.06
SDHA-220ENST00000617470 MYBL1P10243 752 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 BRCC3P46736 316 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 TNNC1P63316 161 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 DSTYKQ6XUX3 929 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 HINFPQ9BQA5 517 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 TTC7AQ9ULT0 858 aaPredicted RBP21.68■■□□□ 1.06
SDHA-220ENST00000617470 PCDHB12Q9Y5F1 795 aa21.68■■□□□ 1.06
SDHA-220ENST00000617470 LINC01553A4QN01 128 aa21.67■■□□□ 1.06
SDHA-220ENST00000617470 PEX5P50542 639 aa21.67■■□□□ 1.06
SDHA-220ENST00000617470 SLC7A5Q01650 507 aa21.67■■□□□ 1.06
SDHA-220ENST00000617470 TMEM173Q86WV6 379 aaPredicted RBP21.67■■□□□ 1.06
SDHA-220ENST00000617470 C11orf70Q9BRQ4 267 aa21.67■■□□□ 1.06
SDHA-220ENST00000617470 FUT8Q9BYC5 575 aa21.67■■□□□ 1.06
SDHA-220ENST00000617470 PBX4Q9BYU1 374 aa21.67■■□□□ 1.06
SDHA-220ENST00000617470 CARD9Q9H257 536 aa21.67■■□□□ 1.06
SDHA-220ENST00000617470 MSRAQ9UJ68 235 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms