RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 HLA-DRAP01903 254 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 TRIM49P0CI25 452 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 TRIM49CP0CI26 452 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 PTPN1P18031 435 aaKnown RBP23.66■■□□□ 1.38
CBWD3-212ENST00000616550 VIPR2P41587 438 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 GCLMP48507 274 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 CDH8P55286 799 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 MDH1BQ5I0G3 518 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 STXBP5Q5T5C0 1151 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 VSTM1Q6UX27 236 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 ADSSL1Q8N142 457 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 EEF2KMTQ96G04 330 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 PCED1BQ96HM7 432 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 SHDQ96IW2 340 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 TRMT61BQ9BVS5 477 aaKnown RBP23.66■■□□□ 1.38
CBWD3-212ENST00000616550 IMPG2Q9BZV3 1241 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 SMYD3Q9H7B4 428 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 MMRN2Q9H8L6 949 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 IL21Q9HBE4 155 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 UXTQ9UBK9 157 aaPredicted RBP23.66■■□□□ 1.38
CBWD3-212ENST00000616550 MAN1B1Q9UKM7 699 aa23.66■■□□□ 1.38
CBWD3-212ENST00000616550 PSMA7O14818 248 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 HMGA1P17096 107 aaKnown RBP23.65■■□□□ 1.38
CBWD3-212ENST00000616550 BDNFP23560 247 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 GRIK1P39086 918 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 PPP1R2P41236 205 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 NUBP1P53384 320 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 UBE2HP62256 183 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 FKBP3Q00688 224 aaKnown RBP23.65■■□□□ 1.38
CBWD3-212ENST00000616550 PPP3CAQ08209 521 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 GRM2Q14416 872 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 SLC44A4Q53GD3 710 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 CWF19L1Q69YN2 538 aaKnown RBP23.65■■□□□ 1.38
CBWD3-212ENST00000616550 ANKRD40Q6AI12 368 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 SCARA5Q6ZMJ2 495 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 ARID3BQ8IVW6 561 aaPredicted RBP23.65■■□□□ 1.38
CBWD3-212ENST00000616550 TMEM105Q8N8V8 129 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 ELMO3Q96BJ8 720 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 FAM122AQ96E09 287 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 TASP1Q9H6P5 420 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 ZMYM5Q9UJ78 669 aa23.65■■□□□ 1.38
CBWD3-212ENST00000616550 SLC38A8A6NNN8 435 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 ASS1P00966 412 aaKnown RBP23.64■■□□□ 1.37
CBWD3-212ENST00000616550 PSMC3P17980 439 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 AOC1P19801 751 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 GTF2H1P32780 548 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 CYP4F8P98187 520 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 LRRC63Q05C16 580 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 VITQ6UXI7 678 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 B3GALNT2Q8NCR0 500 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 CCDC150Q8NCX0 1101 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 STKLD1Q8NE28 680 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 DEPDC1BQ8WUY9 529 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 DHTKD1Q96HY7 919 aaPredicted RBP23.64■■□□□ 1.37
CBWD3-212ENST00000616550 DPEP3Q9H4B8 488 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 BRD9Q9H8M2 597 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 TBC1D17Q9HA65 648 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 TMEM8AQ9HCN3 771 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 NME7Q9Y5B8 376 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 DENND4CQ5VZ89 1909 aa23.64■■□□□ 1.37
CBWD3-212ENST00000616550 HEPACAM2A8MVW5 462 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 DPYSL4O14531 572 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 STX10O60499 249 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 NOL4O94818 638 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 F11P03951 625 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 ANXA13P27216 316 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 RAP1GAPP47736 663 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 PMS1P54277 932 aaKnown RBP23.63■■□□□ 1.37
CBWD3-212ENST00000616550 NLRP12P59046 1061 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 PHLDB3Q6NSJ2 640 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 GPIHBP1Q8IV16 184 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 MFSD6LQ8IWD5 586 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 TRMT2BQ96GJ1 504 aaKnown RBP23.63■■□□□ 1.37
CBWD3-212ENST00000616550 TNIP3Q96KP6 325 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 PTPRDP23468 1912 aa23.63■■□□□ 1.37
CBWD3-212ENST00000616550 ZNF638Q14966 1978 aaKnown RBP23.62■■□□□ 1.37
CBWD3-212ENST00000616550 TRIM66O15016 1216 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 PI15O43692 258 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 CCNE1P24864 410 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 DDX6P26196 483 aaKnown RBP eCLIP23.62■■□□□ 1.37
CBWD3-212ENST00000616550 WEE1P30291 646 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 GDI1P31150 447 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 STARD6P59095 220 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 MCCD1P59942 119 aaPredicted RBP23.62■■□□□ 1.37
CBWD3-212ENST00000616550 PRKCQQ04759 706 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 MLF2Q15773 248 aaPredicted RBP23.62■■□□□ 1.37
CBWD3-212ENST00000616550 KRT39Q6A163 491 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 SPOPLQ6IQ16 392 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 YAF2Q8IY57 180 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 TAS1R2Q8TE23 839 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 MRPS31Q92665 395 aaKnown RBP23.62■■□□□ 1.37
CBWD3-212ENST00000616550 IRF7Q92985 503 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 SPATA17Q96L03 361 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 MYRFLQ96LU7 910 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 CEP295NLQ96MC4 621 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 SDCBP2Q9H190 292 aa23.62■■□□□ 1.37
CBWD3-212ENST00000616550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.62■■□□□ 1.37
CBWD3-212ENST00000616550 TRIM49BA6NDI0 452 aa23.61■■□□□ 1.37
CBWD3-212ENST00000616550 ZNF263O14978 683 aa23.61■■□□□ 1.37
CBWD3-212ENST00000616550 SLC16A3O15427 465 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms