RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MUM1Q2TAK8 710 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 C6orf183Q5T699 404 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 C15orf39Q6ZRI6 1047 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 ANKRD49Q8WVL7 239 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 VPS16Q9H269 839 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 PARVBQ9HBI1 364 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 PCSK1NQ9UHG2 260 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 SATB2Q9UPW6 733 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 PPP2R2CQ9Y2T4 447 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 KAT6AQ92794 2004 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 CTAGE15A4D2H0 777 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 ATP2C2O75185 946 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 CTAGE8P0CG41 777 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 MCF2P10911 925 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 KRT13P13646 458 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 GPC3P51654 580 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 TBL3Q12788 808 aaKnown RBP9.27□□□□□ -0.92
VPS11-206ENST00000614944 NLRP9Q7RTR0 991 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 CTAGE6Q86UF2 777 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 CTAGE4Q8IX94 777 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 KIAA0319LQ8IZA0 1049 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 CD99L2Q8TCZ2 262 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 IFT43Q96FT9 208 aa9.27□□□□□ -0.92
VPS11-206ENST00000614944 CCDC162PA2VCL2 907 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 ANKRD63C9JTQ0 380 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 GPR32O75388 356 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 ZNF286BP0CG31 522 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 KRT9P35527 623 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 TUBA4AP68366 448 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 CAP1Q01518 475 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 CYP24A1Q07973 514 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 KCNMA1Q12791 1236 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 WDR45BQ5MNZ6 344 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 PRAMEF19Q5SWL8 479 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 NT5DC4Q86YG4 428 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 LILRB2Q8N423 598 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 LENG1Q96BZ8 264 aaPredicted RBP9.27□□□□□ -0.93
VPS11-206ENST00000614944 CCDC42Q96M95 316 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 GANQ9H2C0 597 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 GTF2IRD1Q9UHL9 959 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 SCOCQ9UIL1 159 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 RASAL2Q9UJF2 1139 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 FAM32AQ9Y421 112 aaKnown RBP9.27□□□□□ -0.93
VPS11-206ENST00000614944 C17orf102A2RUQ5 167 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 SRRM3A6NNA2 597 aaPredicted RBP9.27□□□□□ -0.93
VPS11-206ENST00000614944 ARHGAP6O43182 974 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 TSPAN1O60635 241 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 CLASP2O75122 1294 aaKnown RBP9.27□□□□□ -0.93
VPS11-206ENST00000614944 APOEP02649 317 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 PRKCBP05771 671 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 HSPA6P17066 643 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 FMO5P49326 533 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 LIG4P49917 911 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 VAMP7P51809 220 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 BNIP1Q12981 228 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 SPRED3Q2MJR0 410 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 TMTC4Q5T4D3 741 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 RASIP1Q5U651 963 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 OR52E8Q6IFG1 317 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 KLC3Q6P597 504 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 CYP26C1Q6V0L0 522 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 TMTC1Q8IUR5 882 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 NDUFAF2Q8N183 169 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 LILRB1Q8NHL6 650 aaPredicted RBP9.27□□□□□ -0.93
VPS11-206ENST00000614944 PTPRN2Q92932 1015 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 GBP5Q96PP8 586 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 FNBP1Q96RU3 617 aa9.27□□□□□ -0.93
VPS11-206ENST00000614944 CFAP73A6NFT4 308 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 EXOC3O60645 756 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 TRPA1O75762 1119 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 MYCP01106 439 aaPredicted RBP9.26□□□□□ -0.93
VPS11-206ENST00000614944 ALADP13716 330 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 SNRNP35Q16560 246 aaKnown RBP9.26□□□□□ -0.93
VPS11-206ENST00000614944 EPC2Q52LR7 807 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 C1orf220Q5T0J3 134 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 MPZL3Q6UWV2 235 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 CD302Q8IX05 232 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 DHX38Q92620 1227 aaKnown RBP9.26□□□□□ -0.93
VPS11-206ENST00000614944 IER2Q9BTL4 223 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 DNAI2Q9GZS0 605 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 MIS12Q9H081 205 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 TMEM8AQ9HCN3 771 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 ABHD10Q9NUJ1 306 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 TTC7AQ9ULT0 858 aaPredicted RBP9.26□□□□□ -0.93
VPS11-206ENST00000614944 USH1CQ9Y6N9 552 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 LRRIQ4A6NIV6 560 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 ZNF233A6NK53 670 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 IL18RAPO95256 599 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
VPS11-206ENST00000614944 MARK3P27448 753 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 CASP4P49662 377 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 LSAMPQ13449 338 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 ZNF268Q14587 947 aaPredicted RBP9.26□□□□□ -0.93
VPS11-206ENST00000614944 LONRF1Q17RB8 773 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 DCAF4L1Q3SXM0 396 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 BRSK2Q8IWQ3 736 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 ZNF296Q8WUU4 475 aaPredicted RBP9.26□□□□□ -0.93
VPS11-206ENST00000614944 NCSTNQ92542 709 aa9.26□□□□□ -0.93
VPS11-206ENST00000614944 TCF12Q99081 682 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms