RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 NUDCD1Q96RS6 583 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TRAIPQ9BWF2 469 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DDX56Q9NY93 547 aaKnown RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ABHD2P08910 425 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 GABRB2P47870 512 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PIGHQ14442 188 aaPredicted RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RASA2Q15283 850 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TMED2Q15363 201 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MAPK6Q16659 721 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SGO2Q562F6 1265 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZBTB41Q5SVQ8 909 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TMEM154Q6P9G4 183 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 APBB1IPQ7Z5R6 666 aaPredicted RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 FITM2Q8N6M3 262 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CPA5Q8WXQ8 436 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 IMPG2Q9BZV3 1241 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 STRIP2Q9ULQ0 834 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PLXNB2O15031 1838 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ASB14A6NK59 587 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PRKCBP05771 671 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 OSBPP22059 807 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ASPAP45381 313 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 IRX1P78414 480 aaPredicted RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 LGALS13Q9UHV8 139 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 USP15Q9Y4E8 981 aaPredicted RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ARIH2O95376 493 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZCCHC18P0CG32 403 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MBTD1Q05BQ5 628 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CALCOCO2Q13137 446 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZC3H18Q86VM9 953 aaKnown RBP11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TTC39CQ8N584 583 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CYTH2Q99418 400 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ADAM7Q9H2U9 754 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SLCO1B3Q9NPD5 702 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ACTL7BQ9Y614 415 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 LRRD1A4D1F6 860 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 GAS8O95995 478 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 UBTFL6P0CB48 400 aaPredicted RBP11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MCF2P10911 925 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ABL2P42684 1182 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TNFAIP2Q03169 654 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 OVGP1Q12889 678 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 LRRC36Q1X8D7 754 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MDH1BQ5I0G3 518 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TMEM270Q6UE05 265 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 C4orf33Q8N1A6 199 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TMEM35BQ8NCS4 154 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NAF1Q96HR8 494 aaKnown RBP11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 FAM84AQ96KN4 292 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 KLF6Q99612 283 aaPredicted RBP11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PPCSQ9HAB8 311 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CYP3A43Q9HB55 503 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DNAJC8O75937 253 aaPredicted RBP11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CST3P01034 146 aaPredicted RBP11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 EPHB2P29323 1055 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CPA2P48052 419 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SPATA21Q7Z572 469 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 WDTC1Q8N5D0 677 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CCDC89Q8N998 374 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TEKT4Q8WW24 435 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 C12orf65Q9H3J6 166 aaKnown RBP11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PRMT7Q9NVM4 692 aaPredicted RBP11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 WDR35Q9P2L0 1181 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 FZD1Q9UP38 647 aa11.42□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 GOLGA8RI6L899 631 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MAGEB2O15479 319 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SLC18A1P54219 525 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 KRT17Q04695 432 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 LDLRAD1Q5T700 205 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SPOPLQ6IQ16 392 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SLC30A9Q6PML9 568 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SULF1Q8IWU6 871 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NLGN2Q8NFZ4 835 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NKD2Q969F2 451 aaPredicted RBP11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SH3GL3Q99963 347 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PITPNM3Q9BZ71 974 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ASB7Q9H672 318 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MED7O43513 233 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 C22orf31O95567 290 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 LY6KQ17RY6 165 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SYCP2LQ5T4T6 812 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RIBC1Q8N443 379 aaPredicted RBP11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 UCMAQ8WVF2 138 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SLITRK1Q96PX8 696 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 OSBPL8Q9BZF1 889 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CISHQ9NSE2 258 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 EURLQ9NYK6 297 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NKIRAS1Q9NYS0 192 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZFATQ9P243 1243 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 FETUBQ9UGM5 382 aa11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.41□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SIGLEC16A6NMB1 481 aa11.4□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TLR3O15455 904 aaKnown RBP11.4□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SNX3O60493 162 aa11.4□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CETN2P41208 172 aa11.4□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TAS2R40P59535 323 aa11.4□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZNF252P-AS1Q0IIN9 211 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms