RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 CNNM4Q6P4Q7 775 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 TSSK4Q6SA08 328 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 CXorf38Q8TB03 319 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 ANKRD36BP1Q96IX9 119 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 LRRC3BQ96PB8 259 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 PI4K2AQ9BTU6 479 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 GDAP2Q9NXN4 497 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 OBP2AQ9NY56 170 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 SNX9Q9Y5X1 595 aa23.32■■□□□ 1.32
CBWD1-223ENST00000613988 SLC38A8A6NNN8 435 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 BIN1O00499 593 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 WEE1P30291 646 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 C1orf228Q6PIY5 440 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 MLKLQ8NB16 471 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 RNF214Q8ND24 703 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 MSANTD3Q96H12 275 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 CHRDQ9H2X0 955 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 C8orf33Q9H7E9 229 aaPredicted RBP23.31■■□□□ 1.32
CBWD1-223ENST00000613988 ZSCAN32Q9NX65 697 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 DACH1Q9UI36 760 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 SIX4Q9UIU6 781 aa23.31■■□□□ 1.32
CBWD1-223ENST00000613988 NUP210Q8TEM1 1887 aaPredicted RBP23.31■■□□□ 1.32
CBWD1-223ENST00000613988 ACAT1P24752 427 aaKnown RBP23.3■■□□□ 1.32
CBWD1-223ENST00000613988 MYO1EQ12965 1108 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 CUL4BQ13620 913 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 KCNB1Q14721 858 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 SURF1Q15526 300 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 DPCR1Q3MIW9 517 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 LMBRD2Q68DH5 695 aaPredicted RBP23.3■■□□□ 1.32
CBWD1-223ENST00000613988 SUMF1Q8NBK3 374 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 BPIFB1Q8TDL5 484 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 RUBCNQ92622 972 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 CCDC47Q96A33 483 aaKnown RBP23.3■■□□□ 1.32
CBWD1-223ENST00000613988 ZFYVE19Q96K21 471 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 IER2Q9BTL4 223 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 SLC46A2Q9BY10 475 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 PRMT8Q9NR22 394 aaPredicted RBP23.3■■□□□ 1.32
CBWD1-223ENST00000613988 INTS13Q9NVM9 706 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 HSPBP1Q9NZL4 362 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 ZMYM5Q9UJ78 669 aa23.3■■□□□ 1.32
CBWD1-223ENST00000613988 EIF3DO15371 548 aaKnown RBP eCLIP23.29■■□□□ 1.32
CBWD1-223ENST00000613988 PRAMEF12O95522 483 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 TNNC2P02585 160 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 RPN1P04843 607 aaKnown RBP23.29■■□□□ 1.32
CBWD1-223ENST00000613988 CHRNB1P11230 501 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 HOXD13P35453 343 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 SOX9P48436 509 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 LHX1P48742 406 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 DUOXA2Q1HG44 320 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 INTS6LQ5JSJ4 861 aaKnown RBP23.29■■□□□ 1.32
CBWD1-223ENST00000613988 CBWD2Q8IUF1 395 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 ADGRF2Q8IZF7 708 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 TOP6BLQ8N6T0 577 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 ZBTB44Q8NCP5 570 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 TTC8Q8TAM2 541 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 ZNF507Q8TCN5 953 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 SMG9Q9H0W8 520 aaKnown RBP23.29■■□□□ 1.32
CBWD1-223ENST00000613988 CBX8Q9HC52 389 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 KIAA1586Q9HCI6 787 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 GTF3C4Q9UKN8 822 aa23.29■■□□□ 1.32
CBWD1-223ENST00000613988 MAGED2Q9UNF1 606 aaPredicted RBP23.29■■□□□ 1.32
CBWD1-223ENST00000613988 CSH1P0DML2 217 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 CSH2P0DML3 217 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 HMGA1P17096 107 aaKnown RBP23.28■■□□□ 1.32
CBWD1-223ENST00000613988 CYP2F1P24903 491 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 GPR15P49685 360 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 RPL10AP62906 217 aaKnown RBP23.28■■□□□ 1.32
CBWD1-223ENST00000613988 PLCB2Q00722 1185 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 PPP2R5DQ14738 602 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 FAM26FQ5R3K3 315 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 MAMSTRQ6ZN01 415 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 C11orf57Q6ZUT1 292 aaPredicted RBP23.28■■□□□ 1.32
CBWD1-223ENST00000613988 EPM2AIP1Q7L775 607 aaPredicted RBP23.28■■□□□ 1.32
CBWD1-223ENST00000613988 OSTM1Q86WC4 334 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 CMTM8Q8IZV2 173 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 CELF5Q8N6W0 485 aaKnown RBP23.28■■□□□ 1.32
CBWD1-223ENST00000613988 OR5B17Q8NGF7 314 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 SPATA18Q8TC71 538 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 NELL1Q92832 810 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 BLZF1Q9H2G9 400 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 ABCB6Q9NP58 842 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 THG1LQ9NWX6 298 aaKnown RBP23.28■■□□□ 1.32
CBWD1-223ENST00000613988 GTSE1Q9NYZ3 720 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 PTPRJQ12913 1337 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 OTOGLQ3ZCN5 2332 aa23.28■■□□□ 1.32
CBWD1-223ENST00000613988 SPECC1L-ADORA2AF8WAN1 911 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 F11P03951 625 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 DEKP35659 375 aaKnown RBP23.27■■□□□ 1.32
CBWD1-223ENST00000613988 AVPR1AP37288 418 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 ID4P47928 161 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 DDR2Q16832 855 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 SOWAHAQ2M3V2 549 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 SDHAF4Q5VUM1 108 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 DPH6Q7L8W6 267 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 TMEM150AQ86TG1 271 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 RALGPS2Q86X27 583 aaPredicted RBP23.27■■□□□ 1.32
CBWD1-223ENST00000613988 KIAA2013Q8IYS2 634 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 MAB21L3Q8N8X9 362 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 RDH13Q8NBN7 331 aa23.27■■□□□ 1.32
CBWD1-223ENST00000613988 HPDLQ96IR7 371 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms