RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SGO2Q562F6 1265 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 TEX35Q5T0J7 233 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 CCDC181Q5TID7 509 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 PLEKHA7Q6IQ23 1121 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 AGMOQ6ZNB7 445 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 MMS22LQ6ZRQ5 1243 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 FAM43BQ6ZT52 329 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-207ENST00000612558 DPH6Q7L8W6 267 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 ZNF572Q7Z3I7 529 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-207ENST00000612558 LIMS2Q7Z4I7 341 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 ERICH1Q86X53 443 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 FAM126BQ8IXS8 530 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 WDTC1Q8N5D0 677 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 C1orf131Q8NDD1 294 aaKnown RBP9.45□□□□□ -0.9
CCDC47-207ENST00000612558 RABGGTAQ92696 567 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 HPS1Q92902 700 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 LPPQ93052 612 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 MRPL45Q9BRJ2 306 aaKnown RBP9.45□□□□□ -0.9
CCDC47-207ENST00000612558 SELENOOQ9BVL4 669 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 DNAI2Q9GZS0 605 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 RSAD1Q9HA92 442 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 GOLGA2P5Q9HBQ8 144 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 RGS18Q9NS28 235 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 PARVAQ9NVD7 372 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 HMGXB4Q9UGU5 601 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 CHORDC1Q9UHD1 332 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-207ENST00000612558 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCDC47-207ENST00000612558 SCINQ9Y6U3 715 aa9.45□□□□□ -0.9
CCDC47-207ENST00000612558 O00370 1275 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 PDE2AO00408 941 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-207ENST00000612558 HUS1O60921 280 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 MYCP01106 439 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-207ENST00000612558 RPL9P32969 192 aaKnown RBP9.44□□□□□ -0.9
CCDC47-207ENST00000612558 GNL1P36915 607 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-207ENST00000612558 DNA2P51530 1060 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 ORC1Q13415 861 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 MAMLD1Q13495 774 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 MBTPS1Q14703 1052 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 ELF2Q15723 593 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 C2CD6Q53TS8 623 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 DENND1BQ6P3S1 775 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 LCLAT1Q6UWP7 414 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 LRRC8DQ7L1W4 858 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 ECHDC2Q86YB7 292 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 TOP6BLQ8N6T0 577 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 GPR161Q8N6U8 529 aaKnown RBP9.44□□□□□ -0.9
CCDC47-207ENST00000612558 APPL2Q8NEU8 664 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 OR6B3Q8NGW1 331 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 FTHL17Q9BXU8 183 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 WNT8AQ9H1J5 351 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 MIOSQ9NXC5 875 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 ANAPC7Q9UJX3 599 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 STRIP2Q9ULQ0 834 aa9.44□□□□□ -0.9
CCDC47-207ENST00000612558 TMEM110-MUSTN1A8MSY1 372 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 A8MXQ7 604 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 MYO1FO00160 1098 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 DDX3YO15523 660 aaKnown RBP9.43□□□□□ -0.9
CCDC47-207ENST00000612558 MICAL2O94851 1124 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 EOMESO95936 686 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 COMTP21964 271 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 SLC1A1P43005 524 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 GPD2P43304 727 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 SCNN1GP51170 649 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
CCDC47-207ENST00000612558 TAP1Q03518 808 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 PTPROQ16827 1216 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 SLC24A5Q71RS6 500 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 PHLDB2Q86SQ0 1253 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 CRYBG2Q8N1P7 616 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 UBL4BQ8N7F7 174 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 RNF169Q8NCN4 708 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 MSANTD4Q8NCY6 345 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 FEZF2Q8TBJ5 459 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 ACTRT1Q8TDG2 376 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 KBTBD7Q8WVZ9 684 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 ANKRD7Q92527 254 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 MS4A14Q96JA4 679 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 BTBD6Q96KE9 485 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 LCMT1Q9UIC8 334 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 BRCA2P51587 3418 aa9.43□□□□□ -0.9
CCDC47-207ENST00000612558 C9IYK1 514 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 M0QYV0 167 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 PODXLO00592 558 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 CYB561D2O14569 222 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 INPPL1O15357 1258 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 SPOPO43791 374 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 WARSP23381 471 aaKnown RBP9.42□□□□□ -0.9
CCDC47-207ENST00000612558 PAX3P23760 479 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 CLCNKBP51801 687 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 FAM189BP81408 668 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 GRIK3Q13003 919 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 UPP1Q16831 310 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 PTPN20Q4JDL3 420 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 ARHGAP17Q68EM7 881 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 ACOT1Q86TX2 421 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 RTN4RL1Q86UN2 441 aaPredicted RBP9.42□□□□□ -0.9
CCDC47-207ENST00000612558 ADGRF2Q8IZF7 708 aa9.42□□□□□ -0.9
CCDC47-207ENST00000612558 RASGEF1CQ8N431 466 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms