RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 MYCBPAPQ8TBZ2 947 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 ZNF653Q96CK0 615 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 TTPALQ9BTX7 342 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 IRX2Q9BZI1 471 aaPredicted RBP18.58■□□□□ 0.56
SREK1-216ENST00000612404 SPG21Q9NZD8 308 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 MYO1AQ9UBC5 1043 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 CYTH4Q9UIA0 394 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 PCDHB12Q9Y5F1 795 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 KIF5CO60282 957 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 GPD2P43304 727 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 GPC5P78333 572 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 CTXN3Q4LDR2 81 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 RTP2Q5QGT7 225 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 MON1BQ7L1V2 547 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 ERICH1Q86X53 443 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 PHF13Q86YI8 300 aaPredicted RBP18.57■□□□□ 0.56
SREK1-216ENST00000612404 FUKQ8N0W3 1084 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 ARHGEF26Q96DR7 871 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 PCED1BQ96HM7 432 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 RNPC3Q96LT9 517 aaKnown RBP18.57■□□□□ 0.56
SREK1-216ENST00000612404 HNRNPABQ99729 332 aaKnown RBP18.57■□□□□ 0.56
SREK1-216ENST00000612404 CHORDC1Q9UHD1 332 aaPredicted RBP18.57■□□□□ 0.56
SREK1-216ENST00000612404 ATP8B3O60423 1300 aa18.57■□□□□ 0.56
SREK1-216ENST00000612404 CARNS1A5YM72 827 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 BUB1O43683 1085 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 NOP2P46087 812 aaKnown RBP18.56■□□□□ 0.56
SREK1-216ENST00000612404 USP41Q3LFD5 358 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 ZNF280DQ6N043 979 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 PHLDB2Q86SQ0 1253 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 ANKRD52Q8NB46 1076 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 TRIM11Q96F44 468 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 NOX5Q96PH1 765 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 VN1R3Q9BXE9 311 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 B3GNT5Q9BYG0 378 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 SYNCQ9H7C4 482 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 ST7Q9NRC1 585 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 SALL4Q9UJQ4 1053 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 LCHNA4D1U4 455 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 OR4Q2P0C623 313 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 MMP8P22894 467 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 BCAT1P54687 386 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 PDE4CQ08493 712 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 BST2Q10589 180 aaKnown RBP18.56■□□□□ 0.56
SREK1-216ENST00000612404 LIN9Q5TKA1 542 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 RASIP1Q5U651 963 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 KIAA1841Q6NSI8 718 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 NYAP1Q6ZVC0 841 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 LRRTM3Q86VH5 581 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 MYLPFQ96A32 169 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 CNOT8Q9UFF9 292 aaKnown RBP18.56■□□□□ 0.56
SREK1-216ENST00000612404 MYH10P35580 1976 aa18.56■□□□□ 0.56
SREK1-216ENST00000612404 MOCS3O95396 460 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 PPM1AP35813 382 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 RABGGTBP53611 331 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 SLC8A3P57103 927 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 GNG11P61952 73 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 C1QBPQ07021 282 aaKnown RBP18.55■□□□□ 0.56
SREK1-216ENST00000612404 PDCLQ13371 301 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 SHHQ15465 462 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 MAPRE1Q15691 268 aaKnown RBP18.55■□□□□ 0.56
SREK1-216ENST00000612404 PKDCCQ504Y2 493 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 FAM171BQ6P995 826 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 ANKS3Q6ZW76 656 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 MSANTD4Q8NCY6 345 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 SLC35G2Q8TBE7 412 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 VCPIP1Q96JH7 1222 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 CPXM1Q96SM3 734 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 KRT82Q9NSB4 513 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 TMLHEQ9NVH6 421 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 CTTNBP2NLQ9P2B4 639 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 KIAA1671Q9BY89 1806 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 BTNL10A8MVZ5 291 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 H7C4K7 107 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 TULP2O00295 520 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 C2CD2LO14523 706 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 CALB1P05937 261 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 MYBL1P10243 752 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 RRM1P23921 792 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 RGS7P49802 495 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 PLCB3Q01970 1234 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 MRPL58Q14197 206 aaKnown RBP18.55■□□□□ 0.56
SREK1-216ENST00000612404 PTPN20Q4JDL3 420 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 SLC39A12Q504Y0 691 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 ZNF569Q5MCW4 686 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 CYP4A22Q5TCH4 519 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 PRSS55Q6UWB4 352 aaPredicted RBP18.55■□□□□ 0.56
SREK1-216ENST00000612404 PAQR9Q6ZVX9 377 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 FAM35AQ86V20 835 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 RIN2Q8WYP3 895 aaPredicted RBP18.55■□□□□ 0.56
SREK1-216ENST00000612404 RFFLQ8WZ73 363 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 DUSP16Q9BY84 665 aa18.55■□□□□ 0.56
SREK1-216ENST00000612404 EFEMP2O95967 443 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 FAM200BP0CF97 657 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 ARPP19P56211 112 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 PTP4A2Q12974 167 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 LLGL2Q6P1M3 1020 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 DCP1BQ8IZD4 617 aaKnown RBP18.54■□□□□ 0.56
SREK1-216ENST00000612404 SP7Q8TDD2 431 aaPredicted RBP18.54■□□□□ 0.56
SREK1-216ENST00000612404 PKMYT1Q99640 499 aa18.54■□□□□ 0.56
SREK1-216ENST00000612404 RHOBTB2Q9BYZ6 727 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms