RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 MORF4L2Q15014 288 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 MTFR1Q15390 333 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 CHI3L2Q15782 390 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ANKRD20A2Q5SQ80 823 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ANKRD20A1Q5TYW2 823 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 RGS9BPQ6ZS82 235 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 PLEKHO2Q8TD55 490 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ZNF75CPQ92670 426 aaPredicted RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 KIAA1683Q9H0B3 1180 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 AVENQ9NQS1 362 aaPredicted RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 PIH1D1Q9NWS0 290 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ANGPTL2Q9UKU9 493 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 CLEC11AQ9Y240 323 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 SNX9Q9Y5X1 595 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 MYH15Q9Y2K3 1946 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 LMNAP02545 664 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ITGB3P05106 788 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 SUPT20HL2P0C7V6 817 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ADSSP30520 456 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 DSG3P32926 999 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 CLCN3P51790 818 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 EFNA5P52803 228 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 CNTN2Q02246 1040 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 C1QBPQ07021 282 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 KLC1Q07866 573 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 SUPT20HL1Q3ZLR7 823 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ZBTB41Q5SVQ8 909 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 HEATR6Q6AI08 1181 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ZCCHC9Q8N567 271 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 SEPT1Q8WYJ6 367 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 NAF1Q96HR8 494 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 NSL1Q96IY1 281 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 UBIAD1Q9Y5Z9 338 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 MYH7P12883 1935 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 UMODL1Q5DID0 1318 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 APOL1O14791 398 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 TRPA1O75762 1119 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 PDGFRBP09619 1106 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 UBTFL6P0CB48 400 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 LCP1P13796 627 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 DPEP1P16444 411 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 SERPINB3P29508 390 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 TYK2P29597 1187 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 RFC1P35251 1148 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 TCF7P36402 384 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ATXN3P54252 364 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 SLC12A2P55011 1212 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 AP1B1Q10567 949 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ASPHQ12797 758 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 CRYMQ14894 314 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 SPDYE2Q495Y8 402 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 DALRD3Q5D0E6 543 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ATF7IP2Q5U623 682 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 KIF12Q96FN5 646 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 CGRRF1Q99675 332 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 BATF3Q9NR55 127 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 POLIQ9UNA4 740 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 LAMB4A4D0S4 1761 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 VWA5AO00534 786 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 MAFGO15525 162 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 LIASO43766 372 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 KIF1CO43896 1103 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 UNC5CO95185 931 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 HSPA4LO95757 839 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 SNRPAP09012 282 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 NOMO3P69849 1222 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 EFTUD2Q15029 972 aaKnown RBP eCLIP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 RABGAP1LQ5R372 815 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ANGEL2Q5VTE6 544 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 C6orf89Q6UWU4 347 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ECHDC2Q86YB7 292 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ASAP3Q8TDY4 903 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 TRAPPC12Q8WVT3 735 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ALKBH8Q96BT7 664 aaKnown RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 OTUD5Q96G74 571 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 ZNF317Q96PQ6 595 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 SNX25Q9H3E2 840 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 LRRC4Q9HBW1 653 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 NDE1Q9NXR1 346 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 PIM2Q9P1W9 311 aa7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 KLHL8Q9P2G9 620 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-206ENST00000610556 OGTO15294 1046 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 CFHP08603 1231 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 PAEPP09466 180 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TAC1P20366 129 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 GARSP41250 739 aaKnown RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TNFSF9P41273 254 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 NAMPTP43490 491 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 TMEM62Q0P6H9 643 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 FAAP100Q0VG06 881 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 STX3Q13277 289 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 AMHR2Q16671 573 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 ZACNQ401N2 412 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 LACTB2Q53H82 288 aaPredicted RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 CHADLQ6NUI6 762 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 PRPF39Q86UA1 669 aaKnown RBP7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 RSPH3Q86UC2 560 aa7.17□□□□□ -1.26
SYNPO2-206ENST00000610556 KATNAL2Q8IYT4 538 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms