RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TSHRP16473 764 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 KLRC1P26715 233 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 VIPR2P41587 438 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 BOP1Q14137 746 aaKnown RBP5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 IQCB1Q15051 598 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 SPDYE7PQ495Y7 208 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 FAM209BQ5JX69 171 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 ARMC6Q6NXE6 501 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 TAF2Q6P1X5 1199 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 XRRA1Q6P2D8 792 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 SYCE2Q6PIF2 218 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 CLNKQ7Z7G1 428 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 ADGRG3Q86Y34 549 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 ARHGEF19Q8IW93 802 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 OR56A3Q8NH54 315 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 DEPTORQ8TB45 409 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 POC1BQ8TC44 478 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 RNF31Q96EP0 1072 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 LRIG1Q96JA1 1093 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 ZC3H10Q96K80 434 aaKnown RBP5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 SNX22Q96L94 193 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 PSMD1Q99460 953 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 TTYH3Q9C0H2 523 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 SERHLQ9NQF3 203 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 ZNHIT2Q9UHR6 403 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 ITGB1BP2Q9UKP3 347 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 PADI4Q9UM07 663 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 MAP3K2Q9Y2U5 619 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 NOX1Q9Y5S8 564 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 RAD54BQ9Y620 910 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 ARID4BQ4LE39 1312 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 CENPVL1A0A0U1RR11 272 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 E7ENX8 843 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 APOL1O14791 398 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 RASSF9O75901 435 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 SUN1O94901 812 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 NDUFA10O95299 355 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 MT-ND5P03915 603 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 ATXN1LP0C7T5 689 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 SETSIPP0DME0 302 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 CYP2C9P11712 490 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 GCLCP48506 637 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 TOB1P50616 345 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 ANXA11P50995 505 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 WNT3P56703 355 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 CXADRP78310 365 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 HTRA4P83105 476 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 TAP1Q03518 808 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 TAP2Q03519 686 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 BTKQ06187 659 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 PTPAQ15257 358 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 PREPLQ4J6C6 727 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 KLHDC7AQ5VTJ3 777 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 IZUMO3Q5VZ72 239 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 B3GNTL1Q67FW5 361 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 KCNV1Q6PIU1 500 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 LAYNQ6UX15 382 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 UNC13DQ70J99 1090 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 SKAP1Q86WV1 359 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 RNF152Q8N8N0 203 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 Q8NA96 180 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 ATP11CQ8NB49 1132 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 RAPGEF4Q8WZA2 1011 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 SPSB4Q96A44 273 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 IQCDQ96DY2 449 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 HEPHQ9BQS7 1158 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 COLEC11Q9BWP8 271 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 SMOC2Q9H3U7 446 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 CERS4Q9HA82 394 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 ZSCAN32Q9NX65 697 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 PACSIN3Q9UKS6 424 aa5.2□□□□□ -1.58
SMCHD1-213ENST00000609587 PRAMEF33A0A0G2JMD5 474 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 A0A1W2PS29 197 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 ZAR1LA6NP61 321 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 DCLK1O15075 740 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 TPD52L2O43399 206 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 PRAMEF10O60809 474 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 SOAT2O75908 522 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 ANXA2P07355 339 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 ITGALP20701 1170 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 CARSP49589 748 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 RPS7P62081 194 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 MC2RQ01718 297 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 SATB1Q01826 763 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 FPGSQ05932 587 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 RESTQ13127 1097 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 DYRK1AQ13627 763 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 HIBCHQ6NVY1 386 aaPredicted RBP5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 C1orf228Q6PIY5 440 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 SDR16C5Q8N3Y7 309 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 CPEB3Q8NE35 698 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 IPCEF1Q8WWN9 437 aaPredicted RBP5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 BRI3BPQ8WY22 251 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 TMEM125Q96AQ2 219 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 BOD1Q96IK1 185 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 ALOXE3Q9BYJ1 711 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 CHST8Q9H2A9 424 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 GALNT9Q9HCQ5 603 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 PLCB1Q9NQ66 1216 aa5.19□□□□□ -1.58
SMCHD1-213ENST00000609587 HDAC9Q9UKV0 1011 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms