RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 TRIM59Q8IWR1 403 aa15.22■□□□□ 0.03
HDDC2-209ENST00000609477 TRMT2BQ96GJ1 504 aaKnown RBP15.22■□□□□ 0.03
HDDC2-209ENST00000609477 PCED1BQ96HM7 432 aa15.22■□□□□ 0.03
HDDC2-209ENST00000609477 SPATA17Q96L03 361 aa15.22■□□□□ 0.03
HDDC2-209ENST00000609477 ELOVL4Q9GZR5 314 aa15.22■□□□□ 0.03
HDDC2-209ENST00000609477 MMRN2Q9H8L6 949 aa15.22■□□□□ 0.03
HDDC2-209ENST00000609477 UXTQ9UBK9 157 aaPredicted RBP15.22■□□□□ 0.03
HDDC2-209ENST00000609477 ATP2C2O75185 946 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 MYL4P12829 197 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 PSMC1P62191 440 aaKnown RBP15.21■□□□□ 0.03
HDDC2-209ENST00000609477 CYP27A1Q02318 531 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 SIGLEC14Q08ET2 396 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 HTR4Q13639 388 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 FAM114A1Q8IWE2 563 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 HS6ST3Q8IZP7 471 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 MYLPFQ96A32 169 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 E2F7Q96AV8 911 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 MYRFLQ96LU7 910 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 EPHX3Q9H6B9 360 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 APOBEC3GQ9HC16 384 aaKnown RBP15.21■□□□□ 0.03
HDDC2-209ENST00000609477 NME7Q9Y5B8 376 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.21■□□□□ 0.03
HDDC2-209ENST00000609477 MYO10Q9HD67 2058 aa15.21■□□□□ 0.03
HDDC2-209ENST00000609477 PTPRDP23468 1912 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 HCRTO43612 131 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 ECI2O75521 394 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 SOAT2O75908 522 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 NOL4O94818 638 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 PTMSP20962 102 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 TBXAS1P24557 533 aaPredicted RBP15.2■□□□□ 0.02
HDDC2-209ENST00000609477 DDX6P26196 483 aaKnown RBP eCLIP15.2■□□□□ 0.024e-8■■■□□ 14.7
HDDC2-209ENST00000609477 ANXA13P27216 316 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 WEE1P30291 646 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 GRIK1P39086 918 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 CCR2P41597 374 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 YWHAEP62258 255 aaKnown RBP15.2■□□□□ 0.02
HDDC2-209ENST00000609477 TPD52L1Q16890 204 aaPredicted RBP15.2■□□□□ 0.02
HDDC2-209ENST00000609477 DPCR1Q3MIW9 517 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 ARHGAP15Q53QZ3 475 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 MDH1BQ5I0G3 518 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 SMYD5Q6GMV2 418 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 SPOPLQ6IQ16 392 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 TRIM67Q6ZTA4 783 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 SLC44A3Q8N4M1 653 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 SEMA4DQ92854 862 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 C8orf48Q96LL4 319 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 LPIN3Q9BQK8 851 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 NT5C1AQ9BXI3 368 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 SDCBP2Q9H190 292 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 THAP9Q9H5L6 903 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 TRPV4Q9HBA0 871 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 DUSP12Q9UNI6 340 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 TRIOO75962 3097 aa15.2■□□□□ 0.02
HDDC2-209ENST00000609477 PRR33A8MZF0 331 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 CILPO75339 1184 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 MOSPD3O75425 235 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 AFPP02771 609 aaKnown RBP15.19■□□□□ 0.02
HDDC2-209ENST00000609477 ASGR2P07307 311 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 HMGA1P17096 107 aaKnown RBP15.19■□□□□ 0.02
HDDC2-209ENST00000609477 CEBPBP17676 345 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 BDNFP23560 247 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 GABRR2P28476 465 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 RAP1GAPP47736 663 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 PPP3CCP48454 512 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 NDST1P52848 882 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 KCNH2Q12809 1159 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 DDR2Q16832 855 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 TMEM31Q5JXX7 168 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 CCDC183Q5T5S1 534 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 GAREM2Q75VX8 874 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 BMP8AQ7Z5Y6 402 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 SHKBP1Q8TBC3 707 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 ELSPBP1Q96BH3 223 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 TCEAL4Q96EI5 215 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 MCRS1Q96EZ8 462 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 SMARCD1Q96GM5 515 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 DPEP3Q9H4B8 488 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 NUMBLQ9Y6R0 609 aa15.19■□□□□ 0.02
HDDC2-209ENST00000609477 A0A1W2PRU2 124 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 SLC38A8A6NNN8 435 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 SRFP11831 508 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 SASS6Q6UVJ0 657 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 DENND5BQ6ZUT9 1274 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 ACOT1Q86TX2 421 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 SCN4BQ8IWT1 228 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 GIPC2Q8TF65 315 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 ING5Q8WYH8 240 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 FGF14Q92915 247 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 SMARCD2Q92925 531 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 JAKMIP2Q96AA8 810 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 CNOT6LQ96LI5 555 aaKnown RBP15.18■□□□□ 0.02
HDDC2-209ENST00000609477 FAM81BQ96LP2 452 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 ASB16Q96NS5 453 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 MED15Q96RN5 788 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 B3GNT5Q9BYG0 378 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 ATXN3LQ9H3M9 355 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 IL21Q9HBE4 155 aa15.18■□□□□ 0.02
HDDC2-209ENST00000609477 ZFP14Q9HCL3 533 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms