RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 TGFB1I1O43294 461 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 F13A1P00488 732 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 HOXC13P31276 330 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 AVPR1AP37288 418 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 CXCL12P48061 93 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 LHX1P48742 406 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 CYP2J2P51589 502 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 PSMC1P62191 440 aaKnown RBP17.16■□□□□ 0.34
SGMS1-209ENST00000609445 RPL10AP62906 217 aaKnown RBP17.16■□□□□ 0.34
SGMS1-209ENST00000609445 DMWDQ09019 674 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 MYO1EQ12965 1108 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 LRRC32Q14392 662 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 DUOXA2Q1HG44 320 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 TRIM68Q6AZZ1 485 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 CNNM4Q6P4Q7 775 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 SPATA2LQ8IUW3 424 aaPredicted RBP17.16■□□□□ 0.34
SGMS1-209ENST00000609445 SCN4BQ8IWT1 228 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 SPEM1Q8N4L4 309 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 MRPS31Q92665 395 aaKnown RBP17.16■□□□□ 0.34
SGMS1-209ENST00000609445 FAM126AQ9BYI3 521 aaPredicted RBP17.16■□□□□ 0.34
SGMS1-209ENST00000609445 ABCB6Q9NP58 842 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 HPS4Q9NQG7 708 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 AGPAT3Q9NRZ7 376 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 THG1LQ9NWX6 298 aaKnown RBP17.16■□□□□ 0.34
SGMS1-209ENST00000609445 NOL4O94818 638 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 LMO2P25791 158 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 DDX6P26196 483 aaKnown RBP eCLIP17.15■□□□□ 0.344e-6■□□□□ 10.2
SGMS1-209ENST00000609445 PCSK1P29120 753 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 PKP1Q13835 747 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 SURF1Q15526 300 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 LPAL2Q16609 132 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 ITPRIPL2Q3MIP1 535 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 C1orf228Q6PIY5 440 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 UNC13DQ70J99 1090 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 TRAPPC11Q7Z392 1133 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 LIMS2Q7Z4I7 341 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 MON1AQ86VX9 555 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 HSCBQ8IWL3 235 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 GRAMD1CQ8IYS0 662 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 SPATA18Q8TC71 538 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 SCFD1Q8WVM8 642 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 SYT15Q9BQS2 421 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 CRTAC1Q9NQ79 661 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 TDP1Q9NUW8 608 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 PCDHA7Q9UN72 937 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 R3HCC1Q9Y3T6 440 aaKnown RBP17.15■□□□□ 0.34
SGMS1-209ENST00000609445 SPTBN2O15020 2390 aa17.15■□□□□ 0.34
SGMS1-209ENST00000609445 OTOL1A6NHN0 477 aaPredicted RBP17.14■□□□□ 0.33
SGMS1-209ENST00000609445 CHURC1-FNTBB4DL54 471 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 CST3P01034 146 aaPredicted RBP17.14■□□□□ 0.33
SGMS1-209ENST00000609445 HSP90AA1P07900 732 aaKnown RBP17.14■□□□□ 0.33
SGMS1-209ENST00000609445 PDGFRBP09619 1106 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 DLATP10515 647 aaKnown RBP17.14■□□□□ 0.33
SGMS1-209ENST00000609445 AFMP43652 599 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 ME1P48163 572 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 FNTBP49356 437 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 NRLP54845 237 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 EHHADHQ08426 723 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 CUL4BQ13620 913 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 PPP2R5DQ14738 602 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 SNRNP35Q16560 246 aaKnown RBP17.14■□□□□ 0.33
SGMS1-209ENST00000609445 CFAP221Q4G0U5 840 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 DGKKQ5KSL6 1271 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 FAM171BQ6P995 826 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 DPH6Q7L8W6 267 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 WDR49Q8IV35 697 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 MYLPFQ96A32 169 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 CYP2S1Q96SQ9 504 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 MMS19Q96T76 1030 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 FAM83CQ9BQN1 747 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 EBF3Q9H4W6 596 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 KIAA1586Q9HCI6 787 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 TRPC7Q9HCX4 862 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 SLC39A2Q9NP94 309 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 ZMYM5Q9UJ78 669 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 SDK1Q7Z5N4 2213 aa17.14■□□□□ 0.33
SGMS1-209ENST00000609445 HELZP42694 1942 aaKnown RBP17.13■□□□□ 0.33
SGMS1-209ENST00000609445 K7ESF4 209 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 ARSAP15289 507 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 CYP24A1Q07973 514 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 SRSF5Q13243 272 aaKnown RBP17.13■□□□□ 0.33
SGMS1-209ENST00000609445 CCINQ13939 588 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 PSMD6Q15008 389 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 HEATR6Q6AI08 1181 aaKnown RBP17.13■□□□□ 0.33
SGMS1-209ENST00000609445 PKN3Q6P5Z2 889 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 TTC16Q8NEE8 873 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 CCDC127Q96BQ5 260 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 CHFRQ96EP1 664 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 TRMT2BQ96GJ1 504 aaKnown RBP17.13■□□□□ 0.33
SGMS1-209ENST00000609445 FUBP3Q96I24 572 aaKnown RBP eCLIP17.13■□□□□ 0.33
SGMS1-209ENST00000609445 SLC22A12Q96S37 553 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 CGRRF1Q99675 332 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 MRPL45Q9BRJ2 306 aaKnown RBP17.13■□□□□ 0.33
SGMS1-209ENST00000609445 MAGEF1Q9HAY2 307 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 UXTQ9UBK9 157 aaPredicted RBP17.13■□□□□ 0.33
SGMS1-209ENST00000609445 CDH9Q9ULB4 789 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 NME7Q9Y5B8 376 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 UBE4BO95155 1302 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms