RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 C2orf27AQ580R0 203 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 RILPL1Q5EBL4 403 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 PMS2CLQ68D20 193 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 ANO7Q6IWH7 933 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 PIGKQ92643 395 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 CALML4Q96GE6 196 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 REEP2Q9BRK0 252 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 SCNM1Q9BWG6 230 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 TMEM206Q9H813 350 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 KIF3AQ9Y496 699 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 WNT6Q9Y6F9 365 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 TCHHQ07283 1943 aa18.68■□□□□ 0.58
CHMP4A-211ENST00000609024 TSC2P49815 1807 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 ATRXP46100 2492 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 ANK1P16157 1881 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 BAHCC1Q9P281 2608 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 FAM189A1O60320 539 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 NFATC1O95644 943 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 RDXP35241 583 aaKnown RBP18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 PNPLA4P41247 253 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 PDE6CP51160 858 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 SEC13P55735 322 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 MYL7Q01449 175 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 DDR2Q16832 855 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 SDHAF4Q5VUM1 108 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 LMBRD2Q68DH5 695 aaPredicted RBP18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 ZCCHC14Q8WYQ9 949 aaKnown RBP18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 SPACA7Q96KW9 195 aa18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 NUSAP1Q9BXS6 441 aaKnown RBP18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 AGO2Q9UKV8 859 aaKnown RBP18.67■□□□□ 0.58
CHMP4A-211ENST00000609024 FRYQ5TBA9 3013 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 HUS1O60921 280 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 GPR15P49685 360 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 ACAP1Q15027 740 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 ARSHQ5FYA8 562 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 NAIF1Q69YI7 327 aaPredicted RBP18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 LPCAT2Q7L5N7 544 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 STKLD1Q8NE28 680 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 DEFB124Q8NES8 71 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 CCSER1Q9C0I3 900 aa18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 R3HCC1Q9Y3T6 440 aaKnown RBP18.66■□□□□ 0.58
CHMP4A-211ENST00000609024 PATE3B3GLJ2 98 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 UBA7P41226 1012 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 ATXN3P54252 364 aaPredicted RBP18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 IRX4P78413 519 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 ATP2C1P98194 919 aaPredicted RBP18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 ZNF77Q15935 545 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 KIAA1211LQ6NV74 962 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 NT5DC4Q86YG4 428 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 SPATA2LQ8IUW3 424 aaPredicted RBP18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 SCN4BQ8IWT1 228 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 EFCAB13Q8IY85 973 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 KCNN1Q92952 543 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 TRMT2BQ96GJ1 504 aaKnown RBP18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 CNOT6LQ96LI5 555 aaKnown RBP18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 CYP2S1Q96SQ9 504 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 ACBD6Q9BR61 282 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 ABCB6Q9NP58 842 aa18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 BCCIPQ9P287 314 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHMP4A-211ENST00000609024 DENND4CQ5VZ89 1909 aa18.64■□□□□ 0.58
CHMP4A-211ENST00000609024 NOL4O94818 638 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 IL18RAPO95256 599 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 HDCP19113 662 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 CYP2F1P24903 491 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 DPP6P42658 865 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 MAPK8P45983 427 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 TFAMQ00059 246 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 EML3Q32P44 896 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 TMEM119Q4V9L6 283 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 TRIM61Q5EBN2 209 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 CCDC33Q8N5R6 958 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 ARL14EPQ8N8R7 260 aaPredicted RBP18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 RIN3Q8TB24 985 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 SH3RF2Q8TEC5 729 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 USP33Q8TEY7 942 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 LEO1Q8WVC0 666 aaPredicted RBP18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 POMGNT1Q8WZA1 660 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 POLMQ9NP87 494 aaPredicted RBP18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 TMLHEQ9NVH6 421 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 DDX43Q9NXZ2 648 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 THADAQ6YHU6 1953 aa18.64■□□□□ 0.57
CHMP4A-211ENST00000609024 SCN1AP35498 2009 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 NUP205Q92621 2012 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 MYMKA6NI61 221 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 SRRM3A6NNA2 597 aaPredicted RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 CDX4O14627 284 aaPredicted RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 SLC26A4O43511 780 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 TOP3BO95985 862 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 BCKDHBP21953 392 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 POU5F1Q01860 360 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 USP4Q13107 963 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 BYSLQ13895 437 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 POSTNQ15063 836 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 ARL6IP4Q66PJ3 421 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 TMEM86AQ8N2M4 240 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 PGBD3Q8N328 593 aa18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 CACTINQ8WUQ7 758 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 EZH1Q92800 747 aaPredicted RBP18.63■□□□□ 0.57
CHMP4A-211ENST00000609024 MYRFLQ96LU7 910 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms