RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 DNAJC24Q6P3W2 148 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 TMEM270Q6UE05 265 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 CAPN12Q6ZSI9 719 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 ANKMY2Q8IV38 441 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 PASD1Q8IV76 773 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 ARHGAP18Q8N392 663 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 NRG4Q8WWG1 115 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 APBB2Q92870 758 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 BICD1Q96G01 975 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 C2CD2Q9Y426 696 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 NUMBLQ9Y6R0 609 aa23.46■■□□□ 1.35
SHANK2-220ENST00000608988 TMEM150BA6NC51 233 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 LPXNO60711 386 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 ETV4P43268 484 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 RAB27AP51159 221 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 ZNF132P52740 706 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 GNPTABQ3T906 1256 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 ATP13A4Q4VNC1 1196 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 XRRA1Q6P2D8 792 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 PALM2Q8IXS6 379 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 PDIK1LQ8N165 341 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 SMC1BQ8NDV3 1235 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 CCDC110Q8TBZ0 833 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 CPT1BQ92523 772 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 GATA6Q92908 595 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 MASTLQ96GX5 879 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 OXNAD1Q96HP4 312 aaPredicted RBP23.45■■□□□ 1.35
SHANK2-220ENST00000608988 TAS2R1Q9NYW7 299 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 ARHGAP28Q9P2N2 729 aa23.45■■□□□ 1.35
SHANK2-220ENST00000608988 DGAT1O75907 488 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 VNN1O95497 513 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 TNNI1P19237 187 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 SERPINB3P29508 390 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 RFC5P40937 340 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 PLCB3Q01970 1234 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 TBCCQ15814 346 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 RINLQ6ZS11 566 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 ANO5Q75V66 913 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 NET1Q7Z628 596 aaPredicted RBP23.45■■□□□ 1.34
SHANK2-220ENST00000608988 ZNF184Q99676 751 aaPredicted RBP23.45■■□□□ 1.34
SHANK2-220ENST00000608988 TMEM121Q9BTD3 319 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 KLHL11Q9NVR0 708 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 KCNK4Q9NYG8 393 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.45■■□□□ 1.34
SHANK2-220ENST00000608988 SLC17A7Q9P2U7 560 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 STRIP2Q9ULQ0 834 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 ZNRF3Q9ULT6 936 aa23.45■■□□□ 1.34
SHANK2-220ENST00000608988 TBX10O75333 385 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 SSTR1P30872 391 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 CAP2P40123 477 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 SESN3P58005 492 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 INHBEP58166 350 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 OVGP1Q12889 678 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 C6orf163Q5TEZ5 329 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 TMPRSS6Q8IU80 811 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 FBXO36Q8NEA4 188 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 AGBL1Q96MI9 1066 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 PDLIM7Q9NR12 457 aa23.44■■□□□ 1.34
SHANK2-220ENST00000608988 WDR91A4D1P6 747 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 CCNE2O96020 404 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 IFNB1P01574 187 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 CFHP08603 1231 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 KCNA3P22001 575 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 PGM1P36871 562 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 ZNF252P-AS1Q0IIN9 211 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 TRMT5Q32P41 509 aaKnown RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 TBC1D10BQ4KMP7 808 aaPredicted RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 FNBP1LQ5T0N5 605 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 WDR78Q5VTH9 848 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 BBS12Q6ZW61 710 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 RHPN2Q8IUC4 686 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 SCYL3Q8IZE3 742 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 PDCD7Q8N8D1 485 aaKnown RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 SYTL5Q8TDW5 730 aaPredicted RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 ATP6V0A1Q93050 837 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 ELMO3Q96BJ8 720 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 MRRFQ96E11 262 aaKnown RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 SH2D3AQ9BRG2 576 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 CNTN3Q9P232 1028 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 USP21Q9UK80 565 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 ARID2Q68CP9 1835 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 FCHO1O14526 889 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 LDHAP00338 332 aaKnown RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 LIG4P49917 911 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 CACNA2D1P54289 1103 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 RPL7AP62424 266 aaKnown RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 DYNC1I2Q13409 638 aaKnown RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 EFTUD2Q15029 972 aaKnown RBP eCLIP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 TAZQ16635 292 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 PPP1R15BQ5SWA1 713 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 SLFN12LQ6IEE8 588 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 DCUN1D2Q6PH85 259 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 ZC3H18Q86VM9 953 aaKnown RBP23.43■■□□□ 1.34
SHANK2-220ENST00000608988 LRRC6Q86X45 466 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 THNSL1Q8IYQ7 743 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 UBR7Q8N806 425 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 UCMAQ8WVF2 138 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 FAM151AQ8WW52 585 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 SLC44A1Q8WWI5 657 aa23.43■■□□□ 1.34
SHANK2-220ENST00000608988 CEP170P1Q96L14 293 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms