RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 ADAMTS20P59510 1910 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 TRAV19A0A0A6YYK7 116 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 CYB561D2O14569 222 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 ZIC2O95409 532 aaPredicted RBP16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 NFATC1O95644 943 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 PLS3P13797 630 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 RAD51AP2Q09MP3 1159 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 MAPK7Q13164 816 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 ZNF77Q15935 545 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 DUOXA1Q1HG43 343 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 C9orf57Q5W0N0 161 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 RAB44Q7Z6P3 723 aaPredicted RBP16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 CD302Q8IX05 232 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 EFCAB13Q8IY85 973 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 PGBD3Q8N328 593 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 TMEM161BQ8NDZ6 487 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 OLIG1Q8TAK6 271 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 FNBP1Q96RU3 617 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 PYM1Q9BRP8 204 aaKnown RBP16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 TMEM206Q9H813 350 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 PCDHB9Q9Y5E1 797 aa16.61■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 H0YCG3 227 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 K7EQS6 105 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 CAPNS1P04632 268 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 MAPTP10636 758 aaKnown RBP16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 HOXD12P35452 270 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 LIG4P49917 911 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 FAM193AP78312 1265 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 MRPS21P82921 87 aaKnown RBP16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 USP4Q13107 963 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 PDIA5Q14554 519 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 ENOX2Q16206 610 aaKnown RBP16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 KRT79Q5XKE5 535 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 JADE1Q6IE81 842 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 C1orf186Q6ZWK4 172 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 LRRTM3Q86VH5 581 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 FSIP1Q8NA03 581 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 STKLD1Q8NE28 680 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 CYP2S1Q96SQ9 504 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 PI4K2AQ9BTU6 479 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 HAPLN2Q9GZV7 340 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 PILRBQ9UKJ0 227 aa16.6■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 HNRNPDLO14979 420 aaKnown RBP16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 OGTO15294 1046 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 AP5Z1O43299 807 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 ITPKAP23677 461 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 GPR15P49685 360 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 TSPY1Q01534 308 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 GUCY1B3Q02153 619 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 GNL2Q13823 731 aaKnown RBP16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 KCNB1Q14721 858 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 TMEM132DQ14C87 1099 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 TMEM92Q6UXU6 159 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 RABEPKQ7Z6M1 372 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 MINDY1Q8N5J2 469 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 ALLCQ8N6M5 410 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 TXNDC5Q8NBS9 432 aaKnown RBP16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 NSUN7Q8NE18 718 aaKnown RBP16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 SH3RF2Q8TEC5 729 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 HNRNPLLQ8WVV9 542 aaKnown RBP16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 HMGB4Q8WW32 186 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 FSCN3Q9NQT6 498 aa16.59■□□□□ 0.25
NEDD8-MDP1-204ENST00000605847 MYMKA6NI61 221 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 PIRO00625 290 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 KLF8O95600 359 aaPredicted RBP16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 SERPINF2P08697 491 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 GUCY2CP25092 1073 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 TIE1P35590 1138 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 OPRD1P41143 372 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 TAF6P49848 677 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 RPL10AP62906 217 aaKnown RBP16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 TRIP6Q15654 476 aaKnown RBP16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 NFE2Q16621 373 aaPredicted RBP16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 EOGTQ5NDL2 527 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 SDHAF4Q5VUM1 108 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 WSCD1Q658N2 575 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 FRMD1Q8N878 549 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 LINC00597Q9H2U6 94 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 ABCA7Q8IZY2 2146 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 FREM2Q5SZK8 3169 aa16.58■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 JAK2O60674 1132 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 TADA3O75528 432 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 SYPP08247 313 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 NFICP08651 508 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 RPL6Q02878 288 aaKnown RBP16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 ME3Q16798 604 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 HSF5Q4G112 596 aaPredicted RBP16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 PEAR1Q5VY43 1037 aaPredicted RBP16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 ARL14EPQ8N8R7 260 aaPredicted RBP16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 TRMT2BQ96GJ1 504 aaKnown RBP16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 LRIG1Q96JA1 1093 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 SLC22A12Q96S37 553 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 MSTO1Q9BUK6 570 aa16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 LARSQ9P2J5 1176 aaKnown RBP16.57■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms