RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PDE6CP51160 858 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 MCCD1P59942 119 aaPredicted RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 PSMC1P62191 440 aaKnown RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 GPC5P78333 572 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 PRKCQQ04759 706 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 GPR158Q5T848 1215 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 SCARA3Q6AZY7 606 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 TANGO2Q6ICL3 276 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 FOXR2Q6PJQ5 311 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 GAREM2Q75VX8 874 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 UNC93AQ86WB7 457 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 SCN4BQ8IWT1 228 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 TRIML1Q8N9V2 468 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 B3GALNT2Q8NCR0 500 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 FLCNQ8NFG4 579 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 GPR152Q8TDT2 470 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 MRPS31Q92665 395 aaKnown RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 DNASE1L2Q92874 299 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 IRF7Q92985 503 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 MYLPFQ96A32 169 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 SPATA17Q96L03 361 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 MYRFLQ96LU7 910 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 MRPL45Q9BRJ2 306 aaKnown RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 FAM124BQ9H5Z6 455 aaPredicted RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 CYP3A43Q9HB55 503 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 METTL14Q9HCE5 456 aaKnown RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 ZNF334Q9HCZ1 680 aaPredicted RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 MAN1B1Q9UKM7 699 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 ATP2C2O75185 946 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 GADD45BO75293 160 aaPredicted RBP12.31□□□□□ -0.44
CCDC12-209ENST00000604164 NOL4O94818 638 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 VNN1O95497 513 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 FGFR1OPO95684 399 aaKnown RBP12.31□□□□□ -0.44
CCDC12-209ENST00000604164 GJA1P17302 382 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 BDNFP23560 247 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 PPP3CCP48454 512 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 GCLMP48507 274 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 NLRP12P59046 1061 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 DDR2Q16832 855 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 MDH1BQ5I0G3 518 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 C1orf228Q6PIY5 440 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 MFSD6LQ8IWD5 586 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 ZC3H3Q8IXZ2 948 aaKnown RBP12.31□□□□□ -0.44
CCDC12-209ENST00000604164 FAM122AQ96E09 287 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 PCED1BQ96HM7 432 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 RPP25Q9BUL9 199 aaKnown RBP12.31□□□□□ -0.44
CCDC12-209ENST00000604164 BRD9Q9H8M2 597 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 CRTAC1Q9NQ79 661 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 TRPV5Q9NQA5 729 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 THG1LQ9NWX6 298 aaKnown RBP12.31□□□□□ -0.44
CCDC12-209ENST00000604164 ARMCX3Q9UH62 379 aaPredicted RBP12.31□□□□□ -0.44
CCDC12-209ENST00000604164 CA14Q9ULX7 337 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 MAGED2Q9UNF1 606 aaPredicted RBP12.31□□□□□ -0.44
CCDC12-209ENST00000604164 MRPS17Q9Y2R5 130 aaKnown RBP12.31□□□□□ -0.44
CCDC12-209ENST00000604164 NOTCH4Q99466 2003 aa12.31□□□□□ -0.44
CCDC12-209ENST00000604164 DOCK6Q96HP0 2047 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 SLC38A8A6NNN8 435 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 ZNF263O14978 683 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 GNA14O95837 355 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 PDGFBP01127 241 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-209ENST00000604164 TRIM49P0CI25 452 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 TRIM49CP0CI26 452 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 GLULP15104 373 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 HMGA1P17096 107 aaKnown RBP12.3□□□□□ -0.44
CCDC12-209ENST00000604164 PFKLP17858 780 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 AOC1P19801 751 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 FCARP24071 287 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 AVPR1AP37288 418 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 MXI1P50539 228 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 PTPN5P54829 565 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 STARD6P59095 220 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 NOP14P78316 857 aaKnown RBP12.3□□□□□ -0.44
CCDC12-209ENST00000604164 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 PPP3CAQ08209 521 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 CETN1Q12798 172 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 MORC3Q14149 939 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 MLF2Q15773 248 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-209ENST00000604164 SLC44A4Q53GD3 710 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 C1orf220Q5T0J3 134 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 TCERG1LQ5VWI1 586 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 SCARA5Q6ZMJ2 495 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 FRMD5Q7Z6J6 570 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 FILIP1Q7Z7B0 1213 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 ARID3BQ8IVW6 561 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-209ENST00000604164 FBXL13Q8NEE6 735 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 ERCC4Q92889 916 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-209ENST00000604164 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 C8orf48Q96LL4 319 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 ZSWIM3Q96MP5 696 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 NELL2Q99435 816 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 SMYD3Q9H7B4 428 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 MMRN2Q9H8L6 949 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 TBC1D17Q9HA65 648 aa12.3□□□□□ -0.44
CCDC12-209ENST00000604164 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms