RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 FAM160A1Q05DH4 1040 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 NR1H3Q13133 447 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 CCDC6Q16204 474 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 C4orf50Q6ZRC1 276 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 PRR23CQ6ZRP0 262 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 USP49Q70CQ1 688 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 CCDC65Q8IXS2 484 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 GAB3Q8WWW8 586 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 PI4K2AQ9BTU6 479 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 ZSCAN16Q9H4T2 348 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 RALGAPA1Q6GYQ0 2036 aa19.13■□□□□ 0.65
SHKBP1-227ENST00000602011 ZFHX4Q86UP3 3567 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 GABRDO14764 452 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 USP17L7P0C7H9 530 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 TMEM191BP0C7N4 346 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 STAT6P42226 847 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 MAGEA11P43364 429 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 TXNDC8Q6A555 127 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 VSTM1Q6UX27 236 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 SPATA2LQ8IUW3 424 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 CPA6Q8N4T0 437 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 INTS4Q96HW7 963 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 ANKRD36BP1Q96IX9 119 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 HPS4Q9NQG7 708 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 PANK4Q9NVE7 773 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 TMLHEQ9NVH6 421 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 L1RE1Q9UN81 338 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 MAGED2Q9UNF1 606 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 PCDHGA5Q9Y5G8 931 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 SNX9Q9Y5X1 595 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 SCN1AP35498 2009 aa19.12■□□□□ 0.65
SHKBP1-227ENST00000602011 TRAV19A0A0A6YYK7 116 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 ZNF233A6NK53 670 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 TCF3P15923 654 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 PPP3CCP48454 512 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 LIMK1P53667 647 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 AMPD3Q01432 767 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 KCNA1Q09470 495 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 SLC39A14Q15043 492 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 ST3GAL2Q16842 350 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 DUOXA2Q1HG44 320 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 FAM171BQ6P995 826 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 GPD1LQ8N335 351 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 FAM160A2Q8N612 972 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 ATP2A3Q93084 1043 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 CUEDC2Q9H467 287 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 EBF3Q9H4W6 596 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 GTF3C4Q9UKN8 822 aa19.11■□□□□ 0.65
SHKBP1-227ENST00000602011 NUP210Q8TEM1 1887 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 CNOT1A5YKK6 2376 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 RPP40O75818 363 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 TNNC2P02585 160 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 KRT19P08727 400 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 CYP2F1P24903 491 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 PXNP49023 591 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 GALK1P51570 392 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 SNRPFP62306 86 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 DDR2Q16832 855 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 FSTL4Q6MZW2 842 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 PKN3Q6P5Z2 889 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 ADGRF2Q8IZF7 708 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 CXorf38Q8TB03 319 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 OSCP1Q8WVF1 389 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 SAAL1Q96ER3 474 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 ZC3H10Q96K80 434 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 SPATA17Q96L03 361 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 PKMYT1Q99640 499 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 P2RY13Q9BPV8 354 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 SMG9Q9H0W8 520 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 INTS13Q9NVM9 706 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 TBC1D7Q9P0N9 293 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 CDH9Q9ULB4 789 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 CCL26Q9Y258 94 aa19.1■□□□□ 0.65
SHKBP1-227ENST00000602011 KIF26AQ9ULI4 1882 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 USP24Q9UPU5 2620 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 ZNF806P0C7X5 589 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 SYT1P21579 422 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 RESTQ13127 1097 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 MTF1Q14872 753 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 SF3A2Q15428 464 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 LIMS2Q7Z4I7 341 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 ACDQ96AP0 544 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 CLIC6Q96NY7 704 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 TNMDQ9H2S6 317 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 ECT2Q9H8V3 914 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 PDE11AQ9HCR9 933 aa19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 POLR3BQ9NW08 1133 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 DUS2Q9NX74 493 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 MAGEC2Q9UBF1 373 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-227ENST00000602011 TULP1O00294 542 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 AXIN1O15169 862 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 CKMP06732 381 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 CCDC192P0DO97 292 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 PDIA4P13667 645 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 GJA4P35212 333 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 RAP1GAPP47736 663 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 IFNAR2P48551 515 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 SOWAHAQ2M3V2 549 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 IL31Q6EBC2 164 aa19.08■□□□□ 0.64
SHKBP1-227ENST00000602011 SYT13Q7L8C5 426 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms