RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 LIMS2Q7Z4I7 341 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 TAF4BQ92750 862 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 ELSPBP1Q96BH3 223 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 ZSWIM3Q96MP5 696 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 ASB16Q96NS5 453 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 PKMYT1Q99640 499 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 MED10Q9BTT4 135 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 LRRC3Q9BY71 257 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 DPEP3Q9H4B8 488 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 WNT16Q9UBV4 365 aa16.94■□□□□ 0.3
PPFIA4-213ENST00000601609 DPYSL4O14531 572 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 SLC16A3O15427 465 aaKnown RBP16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 TRIM21P19474 475 aaKnown RBP16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 CCNE1P24864 410 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 MXI1P50539 228 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 PMS1P54277 932 aaKnown RBP16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 VCPP55072 806 aaKnown RBP16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 PFKPQ01813 784 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 PPP3CAQ08209 521 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 CFAP221Q4G0U5 840 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 C1orf220Q5T0J3 134 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 FAM171BQ6P995 826 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 GAREM2Q75VX8 874 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 YAF2Q8IY57 180 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 B3GALNT2Q8NCR0 500 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 MYCBPAPQ8TBZ2 947 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 PCED1BQ96HM7 432 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 DHTKD1Q96HY7 919 aaPredicted RBP16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 VRTNQ9H8Y1 702 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 TMEM8AQ9HCN3 771 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 ARHGEF3Q9NR81 526 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 ATP8B3O60423 1300 aa16.93■□□□□ 0.3
PPFIA4-213ENST00000601609 SLC38A8A6NNN8 435 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 FAM163BP0C2L3 166 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 PTPN1P18031 435 aaKnown RBP16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 VIPR2P41587 438 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 NOP14P78316 857 aaKnown RBP16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 ENPEPQ07075 957 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 CCDC40Q4G0X9 1142 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 KRT39Q6A163 491 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 GPIHBP1Q8IV16 184 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 TAS1R2Q8TE23 839 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 NELFBQ8WX92 580 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 MRPS31Q92665 395 aaKnown RBP16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 TNIP3Q96KP6 325 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 PLA2G2FQ9BZM2 168 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 BRD9Q9H8M2 597 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 SLC2A4RGQ9NR83 387 aa16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 UXTQ9UBK9 157 aaPredicted RBP16.92■□□□□ 0.3
PPFIA4-213ENST00000601609 BICDL2A1A5D9 508 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 TRIM66O15016 1216 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 ASS1P00966 412 aaKnown RBP16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 FCARP24071 287 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 AVPR2P30518 371 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 GTF2H1P32780 548 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 MAGEA11P43364 429 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 ORC1Q13415 861 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 MORC3Q14149 939 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 ASTLQ6HA08 431 aaPredicted RBP16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 POTEHQ6S545 545 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 VSTM1Q6UX27 236 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 DEPDC1BQ8WUY9 529 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 TRMT61BQ9BVS5 477 aaKnown RBP16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 ELOVL4Q9GZR5 314 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 SDCBP2Q9H190 292 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 TASP1Q9H6P5 420 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 TBC1D17Q9HA65 648 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 IL21Q9HBE4 155 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 TRPC7Q9HCX4 862 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 ARMCX3Q9UH62 379 aaPredicted RBP16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 NME7Q9Y5B8 376 aa16.91■□□□□ 0.3
PPFIA4-213ENST00000601609 KRBA1A5PL33 1030 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 HEPACAM2A8MVW5 462 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 NOL4O94818 638 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 CD58P19256 250 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 GDI1P31150 447 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 AVPR1AP37288 418 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 STX17P56962 302 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 NLRP12P59046 1061 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 IFRD2Q12894 506 aaPredicted RBP16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 PAK1Q13153 545 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 VITQ6UXI7 678 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 ACOT1Q86TX2 421 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 ARID3BQ8IVW6 561 aaPredicted RBP16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 TTC16Q8NEE8 873 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 E2F7Q96AV8 911 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 SHDQ96IW2 340 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 ZNF518BQ9C0D4 1074 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 DNAI2Q9GZS0 605 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 NIF3L1Q9GZT8 377 aa16.9■□□□□ 0.3
PPFIA4-213ENST00000601609 F8VP50 259 aa16.89■□□□□ 0.29
PPFIA4-213ENST00000601609 CLDN5O00501 218 aa16.89■□□□□ 0.29
PPFIA4-213ENST00000601609 ZNF263O14978 683 aa16.89■□□□□ 0.29
PPFIA4-213ENST00000601609 HMGA1P17096 107 aaKnown RBP16.89■□□□□ 0.29
PPFIA4-213ENST00000601609 PSMC3P17980 439 aa16.89■□□□□ 0.29
PPFIA4-213ENST00000601609 ASPAP45381 313 aa16.89■□□□□ 0.29
PPFIA4-213ENST00000601609 NDST1P52848 882 aa16.89■□□□□ 0.29
PPFIA4-213ENST00000601609 MLF2Q15773 248 aaPredicted RBP16.89■□□□□ 0.29
PPFIA4-213ENST00000601609 WDR44Q5JSH3 913 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms