RNA–Protein interactions for RNA: ENST00000601605.5

PRKD2-215, Transcript of protein kinase D2, human

TSL 5

Gene PRKD2, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-215	ENST00000601605	FAM171B	Q6P995	826 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	NOP9	Q86U38	636 aa	Known RBP	13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	GLYCTK	Q8IVS8	523 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	CCDC170	Q8IYT3	715 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	MRPL43	Q8N983	215 aa	Known RBP	13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	C12orf29	Q8N999	325 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	AUTS2	Q8WXX7	1259 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	PCED1B	Q96HM7	432 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	HNRNPAB	Q99729	332 aa	Known RBP	13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	RXFP1	Q9HBX9	757 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	ABCB6	Q9NP58	842 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	LUC7L	Q9NQ29	371 aa	Known RBP	13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	TSPAN16	Q9UKR8	245 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	LAMA2	P24043	3122 aa	Known RBP	13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605	MYH10	P35580	1976 aa		13.78	□□□□□ -0.2
PRKD2-215	ENST00000601605		O00370	1275 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	FSCN2	O14926	492 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	TRIM66	O15016	1216 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	TEX28	O15482	410 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	TBC1D4	O60343	1298 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	ATP2C2	O75185	946 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	LSM8	O95777	96 aa	Known RBP	13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	OR4Q2	P0C623	313 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	SKIL	P12757	684 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	CCDC130	P13994	396 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	RPL17	P18621	184 aa	Known RBP	13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	ERVFC1	P60507	584 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	BST2	Q10589	180 aa	Known RBP	13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	CFAP221	Q4G0U5	840 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	E4F1	Q66K89	784 aa	Predicted RBP	13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	LCLAT1	Q6UWP7	414 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	VSTM1	Q6UX27	236 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	SPRED2	Q7Z698	418 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	FAM35A	Q86V20	835 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	LRRC8A	Q8IWT6	810 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	TMEM35B	Q8NCS4	154 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	ZNF461	Q8TAF7	563 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	TRIM44	Q96DX7	344 aa	Predicted RBP	13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	TMEM209	Q96SK2	561 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	CLSTN3	Q9BQT9	956 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	ZNF518B	Q9C0D4	1074 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	MIS12	Q9H081	205 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	KRT82	Q9NSB4	513 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	AFF4	Q9UHB7	1163 aa	Known RBP	13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	NOCT	Q9UK39	431 aa	Known RBP	13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	PCDHGC3	Q9UN70	934 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	NME7	Q9Y5B8	376 aa		13.77	□□□□□ -0.21
PRKD2-215	ENST00000601605	WDR27	A2RRH5	827 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	MTMR11	A4FU01	709 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	C2orf71	A6NGG8	1288 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	SPDYE4	A6NLX3	237 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	AP1G2	O75843	785 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	MICAL2	O94851	1124 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	GLUD1	P00367	558 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	MME	P08473	750 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	CNP	P09543	421 aa	Known RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	SRGAP2B	P0DMP2	458 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	NPR3	P17342	541 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	DNAJB1	P25685	340 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	EIF4A3	P38919	411 aa	Known RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	NSF	P46459	744 aa	Known RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	TUFM	P49411	452 aa	Known RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	PLD1	Q13393	1074 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	RAB33A	Q14088	237 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	SPA17	Q15506	151 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	MGAT5B	Q3V5L5	792 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	LIN9	Q5TKA1	542 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	WDR59	Q6PJI9	974 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	CCDC149	Q6ZUS6	474 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	TXLNB	Q8N3L3	684 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	ANKRD52	Q8NB46	1076 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	IPO4	Q8TEX9	1081 aa	Known RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	SLC20A1	Q8WUM9	679 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	TFAP2B	Q92481	460 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	MRPL38	Q96DV4	380 aa	Known RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	PGLYRP2	Q96PD5	576 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	CDCA3	Q99618	268 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	PKMYT1	Q99640	499 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	SEPT5	Q99719	369 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	B3GNT5	Q9BYG0	378 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	LHX5	Q9H2C1	402 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	SYNC	Q9H7C4	482 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	ACP6	Q9NPH0	428 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	ARHGAP20	Q9P2F6	1191 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	HSFX1	Q9UBD0	423 aa		13.76	□□□□□ -0.21
PRKD2-215	ENST00000601605	PTPRD	P23468	1912 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	PRRG1	O14668	218 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	ARHGAP6	O43182	974 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	LILRB3	O75022	631 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	C1R	P00736	705 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	ATF2	P15336	505 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	BDNF	P23560	247 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	GRIK1	P39086	918 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	MAGEA11	P43364	429 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	KIF11	P52732	1056 aa		13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	RPL10A	P62906	217 aa	Known RBP	13.75	□□□□□ -0.21
PRKD2-215	ENST00000601605	FMO1	Q01740	532 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms