RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 PSMC1P62191 440 aaKnown RBP18.36■□□□□ 0.53
HERC3-214ENST00000601319 TAF12Q16514 161 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 SGSM1Q2NKQ1 1148 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 ARHGAP15Q53QZ3 475 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 VSTM1Q6UX27 236 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 ADSSL1Q8N142 457 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 DEPDC1BQ8WUY9 529 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 DNASE1L2Q92874 299 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 MYLPFQ96A32 169 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 MYRFLQ96LU7 910 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 GCNAQ96QF7 691 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 SLITRK6Q9H5Y7 841 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 SMYD3Q9H7B4 428 aa18.36■□□□□ 0.53
HERC3-214ENST00000601319 NXF1Q9UBU9 619 aaKnown RBP18.36■□□□□ 0.53
HERC3-214ENST00000601319 COL4A3Q01955 1670 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 SOBPA7XYQ1 873 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 CETN3O15182 167 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 SLC16A3O15427 465 aaKnown RBP18.35■□□□□ 0.53
HERC3-214ENST00000601319 TRIM49P0CI25 452 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 TRIM49CP0CI26 452 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 AOC1P19801 751 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 PIK3CAP42336 1068 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 CDR1P51861 262 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 UBE2HP62256 183 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 PHLDB3Q6NSJ2 640 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 FOXR2Q6PJQ5 311 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 TMEM105Q8N8V8 129 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 OR6B3Q8NGW1 331 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 GIPC2Q8TF65 315 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 ERCC4Q92889 916 aaPredicted RBP18.35■□□□□ 0.53
HERC3-214ENST00000601319 PCED1BQ96HM7 432 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 TSG101Q99816 390 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 PLA2G2FQ9BZM2 168 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 ATXN3LQ9H3M9 355 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 TMEM8AQ9HCN3 771 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 MAGEC2Q9UBF1 373 aaPredicted RBP18.35■□□□□ 0.53
HERC3-214ENST00000601319 UXTQ9UBK9 157 aaPredicted RBP18.35■□□□□ 0.53
HERC3-214ENST00000601319 CA14Q9ULX7 337 aa18.35■□□□□ 0.53
HERC3-214ENST00000601319 PSMA7O14818 248 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 HLA-DRAP01903 254 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 PDGFRBP09619 1106 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 EPB41P11171 864 aaKnown RBP18.34■□□□□ 0.53
HERC3-214ENST00000601319 DDX6P26196 483 aaKnown RBP eCLIP18.34■□□□□ 0.53
HERC3-214ENST00000601319 PLA2G5P39877 138 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 GPR15P49685 360 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 NLRP12P59046 1061 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 FKBP3Q00688 224 aaKnown RBP18.34■□□□□ 0.53
HERC3-214ENST00000601319 PRKCQQ04759 706 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 PPP3CAQ08209 521 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 STIM1Q13586 685 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 STXBP5Q5T5C0 1151 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 GPR158Q5T848 1215 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 VITQ6UXI7 678 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 TMEM150AQ86TG1 271 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 B3GALNT2Q8NCR0 500 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 SPATA17Q96L03 361 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 ELOVL4Q9GZR5 314 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 TASP1Q9H6P5 420 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 TRPV5Q9NQA5 729 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 OBP2AQ9NY56 170 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 MAN1B1Q9UKM7 699 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 MYO16Q9Y6X6 1858 aa18.34■□□□□ 0.53
HERC3-214ENST00000601319 CACNA1HO95180 2353 aa18.33■□□□□ 0.53
HERC3-214ENST00000601319 NCANO14594 1321 aa18.33■□□□□ 0.53
HERC3-214ENST00000601319 SLC38A8A6NNN8 435 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 A8MXQ7 604 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 STX10O60499 249 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 F11P03951 625 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 PSMC3P17980 439 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 PTPN1P18031 435 aaKnown RBP18.33■□□□□ 0.52
HERC3-214ENST00000601319 ASPAP45381 313 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 GCLMP48507 274 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 STARD6P59095 220 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 DDR2Q16832 855 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 MDH1BQ5I0G3 518 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 IER5LQ5T953 404 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 MFSD6LQ8IWD5 586 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 PRSS33Q8NF86 280 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 FLCNQ8NFG4 579 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 DHTKD1Q96HY7 919 aaPredicted RBP18.33■□□□□ 0.52
HERC3-214ENST00000601319 SHDQ96IW2 340 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 TNIP3Q96KP6 325 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 DDX23Q9BUQ8 820 aaKnown RBP18.33■□□□□ 0.52
HERC3-214ENST00000601319 TRMT61BQ9BVS5 477 aaKnown RBP18.33■□□□□ 0.52
HERC3-214ENST00000601319 BCO2Q9BYV7 579 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 IMPG2Q9BZV3 1241 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 SDCBP2Q9H190 292 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 TBC1D17Q9HA65 648 aa18.33■□□□□ 0.52
HERC3-214ENST00000601319 TRIM66O15016 1216 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 CCNE1P24864 410 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 VIPR2P41587 438 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 PMS1P54277 932 aaKnown RBP18.32■□□□□ 0.52
HERC3-214ENST00000601319 CYP4F8P98187 520 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 CYP27A1Q02318 531 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 FCHO2Q0JRZ9 810 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 MORC3Q14149 939 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 MLF2Q15773 248 aaPredicted RBP18.32■□□□□ 0.52
HERC3-214ENST00000601319 KRT39Q6A163 491 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 ANKRD40Q6AI12 368 aa18.32■□□□□ 0.52
HERC3-214ENST00000601319 SCARA5Q6ZMJ2 495 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms