RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SNX9Q9Y5X1 595 aa19.33■□□□□ 0.68
CHMP2A-208ENST00000601220 LRP3O75074 770 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 ARSAP15289 507 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 MYL7Q01449 175 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 E2F4Q16254 413 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 CFAP221Q4G0U5 840 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 HEATR6Q6AI08 1181 aaKnown RBP19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 WDR5BQ86VZ2 330 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 GPD1LQ8N335 351 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 OR5B17Q8NGF7 314 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 HPS3Q969F9 1004 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 KIF9Q9HAQ2 790 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 INTS13Q9NVM9 706 aa19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 MAGED2Q9UNF1 606 aaPredicted RBP19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 KIF26AQ9ULI4 1882 aaPredicted RBP19.32■□□□□ 0.68
CHMP2A-208ENST00000601220 LHX1P48742 406 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 RPL10AP62906 217 aaKnown RBP19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 LMBRD2Q68DH5 695 aaPredicted RBP19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 ADGRF2Q8IZF7 708 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 PDILTQ8N807 584 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 LINC00301Q8NCQ3 95 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 KBTBD7Q8WVZ9 684 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 MRPS31Q92665 395 aaKnown RBP19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 SLC22A12Q96S37 553 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 CYP2S1Q96SQ9 504 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 RTKNQ9BST9 563 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 SEMA4GQ9NTN9 838 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 KBTBD4Q9NVX7 518 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 GCNT4Q9P109 453 aa19.31■□□□□ 0.68
CHMP2A-208ENST00000601220 DCDC2BA2VCK2 349 aa19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 ATP2C2O75185 946 aa19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 KRT19P08727 400 aa19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 LMO2P25791 158 aa19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 CSRP2Q16527 193 aa19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 NAIF1Q69YI7 327 aaPredicted RBP19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 DPH6Q7L8W6 267 aa19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 CBWD2Q8IUF1 395 aa19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 FUBP3Q96I24 572 aaKnown RBP eCLIP19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 ZSCAN16Q9H4T2 348 aaPredicted RBP19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 UXTQ9UBK9 157 aaPredicted RBP19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 CDV3Q9UKY7 258 aaKnown RBP19.3■□□□□ 0.68
CHMP2A-208ENST00000601220 TULP1O00294 542 aaPredicted RBP19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 KIAA0391O15091 583 aaKnown RBP19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 EGFP01133 1207 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 MAGEA11P43364 429 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 GALK1P51570 392 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 GRSF1Q12849 480 aaKnown RBP eCLIP19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 PDGFRLQ15198 375 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 ZNF77Q15935 545 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 EPM2AIP1Q7L775 607 aaPredicted RBP19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 CCDC65Q8IXS2 484 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 FAM160A2Q8N612 972 aaPredicted RBP19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 EZH1Q92800 747 aaPredicted RBP19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 HPDLQ96IR7 371 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 TRIM9Q9C026 710 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 TNMDQ9H2S6 317 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 CRTAC1Q9NQ79 661 aa19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 POLR3BQ9NW08 1133 aaPredicted RBP19.29■□□□□ 0.68
CHMP2A-208ENST00000601220 CCDC163A0A0D9SF12 145 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 ZNF233A6NK53 670 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 STX6O43752 255 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 TMEM191BP0C7N4 346 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 PCSK1P29120 753 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 GJA4P35212 333 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 FAM160A1Q05DH4 1040 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 CNNM4Q6P4Q7 775 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 PRR23CQ6ZRP0 262 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 SPATA2LQ8IUW3 424 aaPredicted RBP19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 ZNF507Q8TCN5 953 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 NOC3LQ8WTT2 800 aaKnown RBP19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 OSCP1Q8WVF1 389 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 ANKRD36BP1Q96IX9 119 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 ECT2Q9H8V3 914 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 HSPBP1Q9NZL4 362 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 NME7Q9Y5B8 376 aa19.28■□□□□ 0.68
CHMP2A-208ENST00000601220 SLC30A4O14863 429 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 TGFB1I1O43294 461 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 PXNP49023 591 aaPredicted RBP19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 ZXDBP98169 803 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 MYO1EQ12965 1108 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 USP4Q13107 963 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 MTF1Q14872 753 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 DUOXA2Q1HG44 320 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 CC2D1AQ6P1N0 951 aaPredicted RBP19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 NETO1Q8TDF5 533 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 SPATA17Q96L03 361 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 SYT15Q9BQS2 421 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 FOXD4L1Q9NU39 408 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 CDH9Q9ULB4 789 aa19.27■□□□□ 0.68
CHMP2A-208ENST00000601220 TCHHQ07283 1943 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 DENND4CQ5VZ89 1909 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 C2orf78A6NCI8 922 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 SPTLC2O15270 562 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 EIF3DO15371 548 aaKnown RBP eCLIP19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 GDF9O60383 454 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 RNF40O75150 1001 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 PPP6R2O75170 966 aa19.26■□□□□ 0.67
CHMP2A-208ENST00000601220 CST3P01034 146 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms