RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 RUNX3Q13761 415 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 E2F4Q16254 413 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 CSRP2Q16527 193 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 SDHAF4Q5VUM1 108 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 TXNDC8Q6A555 127 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 PRR23CQ6ZRP0 262 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 FAM160A2Q8N612 972 aaPredicted RBP20.26■□□□□ 0.83
FARP1-229ENST00000600190 ZSWIM2Q8NEG5 633 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 USP13Q92995 863 aaPredicted RBP20.26■□□□□ 0.83
FARP1-229ENST00000600190 SAAL1Q96ER3 474 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 FAM83CQ9BQN1 747 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 TDP1Q9NUW8 608 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 SERTAD1Q9UHV2 236 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 HOOK1Q9UJC3 728 aaKnown RBP20.26■□□□□ 0.83
FARP1-229ENST00000600190 AGAP1Q9UPQ3 857 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 SPTBN2O15020 2390 aa20.26■□□□□ 0.83
FARP1-229ENST00000600190 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.25■□□□□ 0.83
FARP1-229ENST00000600190 PPP1R37O75864 691 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 GCNT3O95395 438 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 MYL1P05976 194 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 DDX6P26196 483 aaKnown RBP eCLIP20.25■□□□□ 0.83
FARP1-229ENST00000600190 PXNP49023 591 aaPredicted RBP20.25■□□□□ 0.83
FARP1-229ENST00000600190 WNT7BP56706 349 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 ASIC1P78348 528 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 GRSF1Q12849 480 aaKnown RBP eCLIP20.25■□□□□ 0.83
FARP1-229ENST00000600190 NFE2Q16621 373 aaPredicted RBP20.25■□□□□ 0.83
FARP1-229ENST00000600190 CC2D1AQ6P1N0 951 aaPredicted RBP20.25■□□□□ 0.83
FARP1-229ENST00000600190 WDR5BQ86VZ2 330 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 PDCL2Q8N4E4 241 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 NOC3LQ8WTT2 800 aaKnown RBP20.25■□□□□ 0.83
FARP1-229ENST00000600190 MRPS31Q92665 395 aaKnown RBP20.25■□□□□ 0.83
FARP1-229ENST00000600190 ACCSQ96QU6 501 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 STRA6Q9BX79 667 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 HPS4Q9NQG7 708 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 DDX43Q9NXZ2 648 aaKnown RBP20.25■□□□□ 0.83
FARP1-229ENST00000600190 PCDHB13Q9Y5F0 798 aa20.25■□□□□ 0.83
FARP1-229ENST00000600190 RALGAPA1Q6GYQ0 2036 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 OTOL1A6NHN0 477 aaPredicted RBP20.24■□□□□ 0.83
FARP1-229ENST00000600190 SLC30A4O14863 429 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 GDF9O60383 454 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 HUS1O60921 280 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 ZNF202O95125 648 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 CSH1P0DML2 217 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 CSH2P0DML3 217 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 ACAT1P24752 427 aaKnown RBP20.24■□□□□ 0.83
FARP1-229ENST00000600190 HOXA6P31267 233 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 NDUFA8P51970 172 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 DDR2Q16832 855 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 TMEM196Q5HYL7 178 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
FARP1-229ENST00000600190 PKN3Q6P5Z2 889 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 SYCP3Q8IZU3 236 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 CSGALNACT2Q8N6G5 542 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 TTC16Q8NEE8 873 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 CACTINQ8WUQ7 758 aaKnown RBP20.24■□□□□ 0.83
FARP1-229ENST00000600190 GBP4Q96PP9 640 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 C7orf25Q9BPX7 421 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 ACBD6Q9BR61 282 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 RBAKQ9NYW8 714 aaPredicted RBP20.24■□□□□ 0.83
FARP1-229ENST00000600190 L1RE1Q9UN81 338 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 HPSEQ9Y251 543 aa20.24■□□□□ 0.83
FARP1-229ENST00000600190 ZNF638Q14966 1978 aaKnown RBP20.24■□□□□ 0.83
FARP1-229ENST00000600190 GOLGA8IPA6NC78 632 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 GOLGA8JA6NMD2 632 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 GOLGA6L22H0YM25 854 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 AXIN1O15169 862 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 KRT19P08727 400 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 CYP2F1P24903 491 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 ALCAMQ13740 583 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 SCARA3Q6AZY7 606 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 FSTL4Q6MZW2 842 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 MON1AQ86VX9 555 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 BRSK2Q8IWQ3 736 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 C1orf127Q8N9H9 656 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 DNAJC19Q96DA6 116 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 FAM84AQ96KN4 292 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 TRIM9Q9C026 710 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 KIF9Q9HAQ2 790 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 GTF3C4Q9UKN8 822 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 SLC8A2Q9UPR5 921 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 DENND4CQ5VZ89 1909 aa20.23■□□□□ 0.83
FARP1-229ENST00000600190 FAM237AA0A1B0GTK4 181 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 TRDMT1O14717 391 aaKnown RBP20.22■□□□□ 0.83
FARP1-229ENST00000600190 ATG13O75143 517 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 LDHAP00338 332 aaKnown RBP20.22■□□□□ 0.83
FARP1-229ENST00000600190 ARSAP15289 507 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 CASP5P51878 434 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 RPL10AP62906 217 aaKnown RBP20.22■□□□□ 0.83
FARP1-229ENST00000600190 AMPD2Q01433 879 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 MYL7Q01449 175 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 PPM1JQ5JR12 505 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 TMEM86AQ8N2M4 240 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 CHFRQ96EP1 664 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 PCIF1Q9H4Z3 704 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 TRPC7Q9HCX4 862 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 SNX9Q9Y5X1 595 aa20.22■□□□□ 0.83
FARP1-229ENST00000600190 PVALEFA0A1B0GWK0 134 aa20.21■□□□□ 0.83
FARP1-229ENST00000600190 SOBPA7XYQ1 873 aa20.21■□□□□ 0.83
FARP1-229ENST00000600190 RPP40O75818 363 aaKnown RBP20.21■□□□□ 0.83
FARP1-229ENST00000600190 EGFP01133 1207 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms