RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 IL21Q9HBE4 155 aa24.14■■□□□ 1.45
CCDC9-204ENST00000599398 HEPACAM2A8MVW5 462 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 A8MXQ7 604 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 GADD45BO75293 160 aaPredicted RBP24.13■■□□□ 1.45
CCDC9-204ENST00000599398 TRIM49P0CI25 452 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 TRIM49CP0CI26 452 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 HMGA1P17096 107 aaKnown RBP24.13■■□□□ 1.45
CCDC9-204ENST00000599398 PSMC3P17980 439 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 BDNFP23560 247 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 PIK3CAP42336 1068 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 NUBP1P53384 320 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 MLF2Q15773 248 aaPredicted RBP24.13■■□□□ 1.45
CCDC9-204ENST00000599398 EDRF1Q3B7T1 1238 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 MDH1BQ5I0G3 518 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 ARID3BQ8IVW6 561 aaPredicted RBP24.13■■□□□ 1.45
CCDC9-204ENST00000599398 DEPDC1BQ8WUY9 529 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 E2F7Q96AV8 911 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 EEF2KMTQ96G04 330 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 MMRN2Q9H8L6 949 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 VRTNQ9H8Y1 702 aa24.13■■□□□ 1.45
CCDC9-204ENST00000599398 DENND4CQ5VZ89 1909 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 DPYSL4O14531 572 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 GALR2O43603 387 aaPredicted RBP24.12■■□□□ 1.45
CCDC9-204ENST00000599398 GDI1P31150 447 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 MAGEA11P43364 429 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 RAP1GAPP47736 663 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 NHLH1Q02575 133 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 SGSM1Q2NKQ1 1148 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 C1orf220Q5T0J3 134 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 PHLDB3Q6NSJ2 640 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 YAF2Q8IY57 180 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 MYCBPAPQ8TBZ2 947 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 PCED1BQ96HM7 432 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 TSG101Q99816 390 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 MKNK1Q9BUB5 465 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 DPEP3Q9H4B8 488 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 TASP1Q9H6P5 420 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 NME7Q9Y5B8 376 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 ZNF638Q14966 1978 aaKnown RBP24.12■■□□□ 1.45
CCDC9-204ENST00000599398 PTPRDP23468 1912 aa24.12■■□□□ 1.45
CCDC9-204ENST00000599398 CACNA1HO95180 2353 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 NUP210Q8TEM1 1887 aaPredicted RBP24.11■■□□□ 1.45
CCDC9-204ENST00000599398 SLC38A8A6NNN8 435 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 CETN3O15182 167 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 HLA-DRAP01903 254 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 P4HA1P13674 534 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 PTPN1P18031 435 aaKnown RBP24.11■■□□□ 1.45
CCDC9-204ENST00000599398 GRIK1P39086 918 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 ANP32AP39687 249 aaKnown RBP24.11■■□□□ 1.45
CCDC9-204ENST00000599398 GCLMP48507 274 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 CDH8P55286 799 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 NLRP12P59046 1061 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 STARD6P59095 220 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 PRKCQQ04759 706 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 TCF15Q12870 199 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 ISM2Q6H9L7 571 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 MFSD6LQ8IWD5 586 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 SPATA20Q8TB22 786 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 IRF7Q92985 503 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 GTPBP4Q9BZE4 634 aaKnown RBP24.11■■□□□ 1.45
CCDC9-204ENST00000599398 FOXQ1Q9C009 403 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.11■■□□□ 1.452e-9■■■■■ 149.6
CCDC9-204ENST00000599398 CHMP5Q9NZZ3 219 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 UXTQ9UBK9 157 aaPredicted RBP24.11■■□□□ 1.45
CCDC9-204ENST00000599398 SIT1Q9Y3P8 196 aa24.11■■□□□ 1.45
CCDC9-204ENST00000599398 NCANO14594 1321 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 ZNF263O14978 683 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 EPB41P11171 864 aaKnown RBP24.1■■□□□ 1.45
CCDC9-204ENST00000599398 ANXA13P27216 316 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 VSTM1Q6UX27 236 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 MRPS31Q92665 395 aaKnown RBP24.1■■□□□ 1.45
CCDC9-204ENST00000599398 TAF4BQ92750 862 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 DNASE1L2Q92874 299 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 RSPRY1Q96DX4 576 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 IMPG2Q9BZV3 1241 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 HEBP1Q9NRV9 189 aa24.1■■□□□ 1.45
CCDC9-204ENST00000599398 OBSL1O75147 1896 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 COL4A3Q01955 1670 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 NOL4O94818 638 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 F11P03951 625 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 DCNP07585 359 aaKnown RBP24.09■■□□□ 1.45
CCDC9-204ENST00000599398 PPP3CAQ08209 521 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 COBLL1Q53SF7 1204 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 SPOPLQ6IQ16 392 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 TPRG1Q6ZUI0 275 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 TMEM150AQ86TG1 271 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 MAB21L3Q8N8X9 362 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 B3GALNT2Q8NCR0 500 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 SLC46A2Q9BY10 475 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 MIA3Q5JRA6 1907 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 TICRRQ7Z2Z1 1910 aa24.09■■□□□ 1.45
CCDC9-204ENST00000599398 KANSL1LA0AUZ9 987 aa24.08■■□□□ 1.45
CCDC9-204ENST00000599398 H0Y858 1186 aa24.08■■□□□ 1.45
CCDC9-204ENST00000599398 PRAMEF12O95522 483 aa24.08■■□□□ 1.45
CCDC9-204ENST00000599398 ASS1P00966 412 aaKnown RBP24.08■■□□□ 1.45
CCDC9-204ENST00000599398 CD72P21854 359 aa24.08■■□□□ 1.45
CCDC9-204ENST00000599398 STIM1Q13586 685 aa24.08■■□□□ 1.45
CCDC9-204ENST00000599398 UBXN2BQ14CS0 331 aa24.08■■□□□ 1.45
CCDC9-204ENST00000599398 ELOA2Q8IYF1 753 aaPredicted RBP24.08■■□□□ 1.45
CCDC9-204ENST00000599398 CCDC105Q8IYK2 499 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms